Pseudomonas syringae pv. helianthi strain ICMP 4531

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas syringae pv. helianthi strain ICMP 4531 is a Gram-negative, heterotrophic bacterium characterized by its rod shape and aerobic metabolism. This strain is notable for its mobility, attributed to the presence of flagella, which facilitates its movement in various environments. It typically exists as single cells rather than forming clusters or chains. The mesophilic nature of this bacterium indicates that it thrives at moderate temperatures, which is relevant for its ecological interactions and growth in diverse environments. As a free-living bacterium, P. syringae pv. helianthi strain ICMP 4531 does not rely on a host organism for its survival, allowing it to occupy a range of ecological niches. The genome of this strain is represented by a single replicon, providing insights into its genetic organization and potential metabolic capabilities. The accession number for this strain is LJQM00000000.1, which serves as a reference point for researchers interested in studying its genetic and biochemical properties. Understanding the traits of Pseudomonas syringae pv. helianthi strain ICMP 4531 contributes to a broader comprehension of its role in the environment, particularly in relation to plant interactions. Its ability to thrive as a free-living organism suggests potential implications for agricultural practices, especially concerning its interactions with crops, which could influence plant health and disease dynamics.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas syringae group genomosp. 7
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Image of Pseudomonas syringae pv. helianthi strain ICMP 4531
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatNot Available
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceHeterotroph
PathogenicityNot Available

Genome Summary

Pseudomonas syringae pv. helianthi strain ICMP 4531

Gene Summary

Adenine Count

1302520 bp

Thymine Count

1301104 bp

Guanine Count

1806531 bp

Cytosine Count

1798138 bp

Genome Length

6208545 bp

Protein-coding Genes

5362 genes

Non-Coding Genes

205 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
peptide methionine sulfoxide reductase msraALO68_00130Q48CJ2Negative6178768 - 617941523430.8
pas:ggdef proteinALO68_04604Not AvailableNegative6179562 - 6182354104156.0
drug resistance transporter, emrb/qaca family proteinALO68_00132C6DBD0Negative6182507 - 618391950029.7
zn-dependent proteaseALO68_00133Not AvailableNegative6183929 - 618525448362.6
peptidase u62, modulator of dna gyraseALO68_00134Not AvailableNegative6185254 - 618669651990.4
threonine aldolaseALO68_04607O50584Negative6187224 - 618803629490.7
uncharacterized proteinALO68_04606Not AvailablePositive6187944 - 618868727629.9
pyoverdine sidechain non-ribosomal peptide synthetase pvddALO68_05582Not AvailableNegative6188705 - 6195372245671.0
pyoverdine sidechain peptide synthetase iii, l-thr-l-ser componentALO68_04132D9XF49Negative6195353 - 619644439871.1
fatty acid desaturaseALO68_00385Not AvailablePositive6197255 - 619821136752.7

Displaying genes 5551 – 5560 of 5567 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

328 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm0000277keto-L-sorboseC6H12O6Chemical structure of keto-L-sorboseNot available
Average180.1559Da
Monoisotopic180.0633881Da
BASm0000344(2R,3S)-homoisocitrateC7H7O7Chemical structure of (2R,3S)-homoisocitrateNot available
Average203.128Da
Monoisotopic203.020823305Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da
BASm00004283-oxoadipateC6H6O5Chemical structure of 3-oxoadipateNot available
Average158.11Da
Monoisotopic158.022620453Da

Displaying 1–10 of 328 metabolites

Health Effects

No health effects information available for this bacterium.