Pseudomonas syringae pv. tagetis

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas syringae pv. tagetis is a Gram-negative, rod-shaped bacterium that occurs as single cells and is classified as a heterotrophic aerobe. This microbe thrives in diverse habitats, which may contribute to its ecological versatility. The aerobic nature of P. syringae pv. tagetis suggests it relies on oxygen for its metabolic processes, which is typical of many bacteria within the Pseudomonas genus. The ability of this bacterium to utilize various organic compounds as energy sources enables it to occupy a range of ecological niches, potentially influencing local microbial communities. Its adaptability to different environments may also facilitate interactions with plants and other organisms in its habitat. Understanding the ecological roles of P. syringae pv. tagetis can provide insights into its contributions to nutrient cycling and its potential interactions with other microbial species.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas syringae group genomosp. 7
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Pseudomonas syringae pv. tagetis
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceHeterotroph
PathogenicityNot Available

Genome Summary

Pseudomonas syringae pv. tagetis strain ICMP 4091

Gene Summary

Adenine Count

1261030 bp

Thymine Count

1264342 bp

Guanine Count

1760319 bp

Cytosine Count

1756586 bp

Genome Length

6042399 bp

Protein-coding Genes

5212 genes

Non-Coding Genes

147 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
AttlNot AvailableNot AvailablePositive787819 - 787875Not Available
IntegraseALO44_00413Not AvailableNegative787993 - 78867025565.8
uncharacterized proteinALO44_00414Not AvailableNegative788740 - 7888925597.72
prophage psssm-02, orf6ALO44_00415Not AvailableNegative789321 - 7895277843.5
uncharacterized proteinALO44_00416Not AvailableNegative790588 - 79112419349.2
uncharacterized proteinALO44_00417Not AvailableNegative791146 - 7913708323.93
Dna methyltransferaseALO44_00418P14243Negative792671 - 79339327098.2
Dna methyltransferaseALO44_00419P30774Negative793393 - 79377313796.6
unknown protein sequenceALO44_00420Not AvailablePositive794527 - 7947398111.63
Hypothetical proteinALO44_00421Not AvailableNegative794774 - 79554129418.1

Displaying genes 1 – 10 of 10811 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

328 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm0000277keto-L-sorboseC6H12O6Chemical structure of keto-L-sorboseNot available
Average180.1559Da
Monoisotopic180.0633881Da
BASm0000344(2R,3S)-homoisocitrateC7H7O7Chemical structure of (2R,3S)-homoisocitrateNot available
Average203.128Da
Monoisotopic203.020823305Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da
BASm00004283-oxoadipateC6H6O5Chemical structure of 3-oxoadipateNot available
Average158.11Da
Monoisotopic158.022620453Da

Displaying 1–10 of 328 metabolites

Health Effects

No health effects information available for this bacterium.