Lactobacillus crispatus strain VMC3

Gram-positiveRodNon-motileFacultative anaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Lactobacillales

Family

Lactobacillaceae

Genus

Lactobacillus

Description

Lactobacillus crispatus strain VMC3 is a Gram-positive, rod-shaped bacterium that typically forms chains and is characterized as a non-sporulating organism. This strain thrives optimally at a temperature of 37.0°C, which suggests its adaptation to warm-blooded hosts. As a facultative anaerobe, L. crispatus strain VMC3 can grow in both aerobic and anaerobic environments, allowing it to colonize various niches within host-associated ecosystems. This strain is primarily associated with the microbiota of the host, where it likely plays a significant role in maintaining microbial balance and contributing to host health. Lactobacillus species, including L. crispatus, are often recognized for their beneficial properties, such as the production of lactic acid, which can help inhibit the growth of pathogenic microorganisms and support the overall stability of the microbial community. The ability of L. crispatus strain VMC3 to exist in both oxygen-rich and oxygen-poor environments within host tissues may provide insights into its ecological versatility and functional contributions to host-associated microbiomes. Further exploration of this strain could enhance our understanding of its specific roles in health and disease, particularly in the context of human microbiota and potential applications in probiotic therapies.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderLactobacillales
FamilyLactobacillaceae
GenusLactobacillus
SpeciesLactobacillus crispatus
Strainstrain VMC3

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes1
Image of Lactobacillus crispatus strain VMC3
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementChains
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Lactobacillus crispatus strain VMC3


Gene Summary

Adenine Count

696210 bp

Thymine Count

700440 bp

Guanine Count

392958 bp

Cytosine Count

411855 bp

Genome Length

2201463 bp

Protein-coding Genes

520 genes

Non-Coding Genes

9 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
5s ribosomal rnaNot AvailableNot Available+118 - 234Not Available
23s ribosomal rnaNot AvailableNot Available+304 - 3215Not Available
hypothetical proteinAEL95_08045Not Available-72 - 78828029.1
hypothetical proteinAEL95_08050Not Available+971 - 141115981.1
cell division protein ftskAEL95_08055Not Available+1429 - 198021092.8
cell division protein ftskAEL95_08060Not Available+1970 - 276429631.6
hypothetical proteinAEL95_08065Not Available+2851 - 367231523.7
hypothetical proteinAEL95_08070Not Available+3672 - 405514941.7
hypothetical proteinAEL95_08075Not Available+4057 - 42367014.51
integraseAEL95_08080Not Available+4282 - 551147814.6

Displaying genes 1 – 10 of 529 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

8 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000400(R)-10-hydroxyoctadecanoateC18H35O3Chemical structure of (R)-10-hydroxyoctadecanoateNot available
Average299.476Da
Monoisotopic299.2591686Da
BASm0001775(9Z)-octadecenoateC18H33O2Chemical structure of (9Z)-octadecenoateNot available
Average281.4534Da
Monoisotopic281.2480553Da
BASm0001833(9Z)-hexadecenoateC16H29O2Chemical structure of (9Z)-hexadecenoateNot available
Average253.4003Da
Monoisotopic253.2167552Da
BASm00027107,8-dihydrofolateC19H19N7O6Chemical structure of 7,8-dihydrofolateNot available
Average441.405Da
Monoisotopic441.1407785Da
BASm0003789S-sulfanylglutathioneC10H17N3O6S2Chemical structure of S-sulfanylglutathioneNot available
Average339.38Da
Monoisotopic339.0558776Da
BASm0004875Fe-coproporphyrin IIIC36H32FeN4O8Not availableNot available
Average704.519Da
Monoisotopic704.159144Da
BASm0010887(4R,5S)-dethiobiotinC10H18N2O3Chemical structure of (4R,5S)-dethiobiotin533-48-2
Average214.2615Da
Monoisotopic214.1317425Da

Displaying 1–8 of 8 metabolites