Candidatus Burkholderia brachyanthoides strain UZHbot7

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Burkholderiaceae

Genus

Burkholderia

Description

Candidatus Burkholderia brachyanthoides strain UZHbot7 is characterized by having a single replicon, which can influence its genetic stability and adaptability within various environments. The strain is cataloged under the accession number LFJI00000000.1, serving as a reference point for genetic and taxonomic studies. As a member of the Burkholderia genus, this strain is likely to share some ecological roles typical of other Burkholderia species, which are recognized for their diverse metabolic capabilities and interactions with plants and other microorganisms. These traits potentially position Candidatus Burkholderia brachyanthoides strain UZHbot7 as a significant player in its ecosystem, particularly in nutrient cycling and plant health. The single replicon structure may suggest a streamlined genomic organization, which can be advantageous for efficient replication and expression of essential genes, particularly in fluctuating environments. Understanding the genetic composition and ecological functions of this strain could provide insights into its role in soil health and plant-microbe interactions, highlighting the importance of microbial diversity in maintaining ecological balance.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyBurkholderiaceae
GenusBurkholderia
SpeciesCandidatus Burkholderia brachyanthoides
Strainstrain UZHbot7

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Candidatus Burkholderia brachyanthoides strain UZHbot7


Gene Summary

Adenine Count

687015 bp

Thymine Count

688701 bp

Guanine Count

1081315 bp

Cytosine Count

1088415 bp

Genome Length

3545532 bp

Protein-coding Genes

1782 genes

Non-Coding Genes

51 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
5s ribosomal rnaNot AvailableNot AvailablePositive138 - 249Not Available
16s ribosomal rnaNot AvailableNot AvailablePositive486 - 2005Not Available
cell division proteinBRCH_01015cNot AvailableNegative232 - 151846178.5
chromosome partition protein smcBRCH_01016cQ3JR19Negative1645 - 5160129985.0
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferaseBRCH_01025A9AHT0Positive7880 - 870729430.2
glutathione-dependent thiol reductaseBRCH_01026P24178Positive8710 - 906913332.2
n-succinyl-l,l-diaminopimelate desuccinylaseBRCH_01027B2T5K8Positive9166 - 1030240790.4
protein-n(5)-glutamine methyltransferase prmb, methylates lsu ribosomal protein l3pBRCH_01028Q63SZ9Positive10363 - 1131935389.1
alanine racemaseBRCH_01035cB2T5L6Negative17312 - 1838238057.0
putative transmembrane proteinBRCH_01036A1JPE9Positive18529 - 1996552428.9

Displaying genes 1 – 10 of 1833 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

151 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm0000275keto-D-sorboseC6H12O6Chemical structure of keto-D-sorboseNot available
Average180.1559Da
Monoisotopic180.0633881Da
BASm0000277keto-L-sorboseC6H12O6Chemical structure of keto-L-sorboseNot available
Average180.1559Da
Monoisotopic180.0633881Da
BASm0000288aminohydroquinoneC6H7NO2Chemical structure of aminohydroquinoneNot available
Average125.127Da
Monoisotopic125.0476785Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da

Displaying 1–10 of 151 metabolites

Health Effects

No health effects information available for this bacterium.