Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain SB14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
944412 bp
Thymine Count
937132 bp
Guanine Count
1721206 bp
Cytosine Count
1742460 bp
Genome Length
5345210 bp
Protein-coding Genes
4612 genes
Non-Coding Genes
132 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SB14R_04400 | Not Available | Positive | 992118 - 993047 | 33780.1 |
| diguanylate cyclase | SB14R_04405 | Not Available | Negative | 993044 - 995197 | 79786.1 |
| cobalamin synthase | SB14R_04410 | A4XT57 | Negative | 995357 - 996088 | 25173.0 |
| alpha-ribazole phosphatase | SB14R_04415 | P52086 | Negative | 996088 - 996639 | 20256.2 |
| nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase | SB14R_04420 | Q02JC0 | Negative | 996632 - 997690 | 36217.8 |
| adenosylcobinamide kinase | SB14R_04425 | Q9I466 | Negative | 997687 - 998208 | 18591.8 |
| cobyric acid synthase | SB14R_04430 | B7UWH3 | Negative | 998209 - 999660 | 51751.5 |
| threonine-phosphate decarboxylase | SB14R_04435 | Q9I468 | Negative | 999657 - 1000646 | 36058.4 |
| cobalamin biosynthesis protein cobd | SB14R_04440 | Q9I469 | Negative | 1000639 - 1001547 | 32945.4 |
| cob(ii)yrinic acid a,c-diamide reductase | SB14R_04445 | Q92PC8 | Negative | 1001544 - 1002194 | 24381.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





