Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain SB14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
944412 bp
Thymine Count
937132 bp
Guanine Count
1721206 bp
Cytosine Count
1742460 bp
Genome Length
5345210 bp
Protein-coding Genes
4612 genes
Non-Coding Genes
132 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| merr family transcriptional regulator | SB14R_04250 | Not Available | Negative | 964202 - 964561 | 14148.1 |
| integration host factor subunit alpha | SB14R_04255 | Q48JR7 | Negative | 964542 - 964844 | 11432.8 |
| phenylalanyl-trna synthetase | SB14R_04260 | Q48JR8 | Negative | 964848 - 967226 | 86552.6 |
| phenylalanyl-trna synthetase | SB14R_04265 | B7V310 | Negative | 967245 - 968246 | 37600.9 |
| 50s ribosomal protein l20 | SB14R_04270 | A4VM19 | Negative | 968343 - 968699 | 13320.7 |
| 50s ribosomal protein l35 | SB14R_04275 | Q48JS1 | Negative | 968730 - 968924 | 7406.49 |
| translation initiation factor if-3 | SB14R_04280 | Q4KEW3 | Negative | 968986 - 969519 | 19974.4 |
| threonyl-trna synthetase | SB14R_04285 | Q1IC15 | Negative | 969540 - 971462 | 73251.3 |
| hypothetical protein | SB14R_04290 | Not Available | Negative | 971669 - 971950 | 10258.4 |
| hypothetical protein | SB14R_04295 | Not Available | Positive | 972412 - 973119 | 24797.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





