Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain SB14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
944412 bp
Thymine Count
937132 bp
Guanine Count
1721206 bp
Cytosine Count
1742460 bp
Genome Length
5345210 bp
Protein-coding Genes
4612 genes
Non-Coding Genes
132 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methionine abc transporter substrate-binding protein | SB14R_04200 | Not Available | Negative | 949293 - 950078 | 28616.4 |
| metal abc transporter permease | SB14R_04205 | Not Available | Negative | 950112 - 950777 | 23902.2 |
| methionine abc transporter atp-binding protein | SB14R_04210 | Q02DK6 | Negative | 950777 - 951784 | 36564.1 |
| hydroperoxidase | SB14R_04215 | P95539 | Positive | 952070 - 954199 | 78592.2 |
| endoribonuclease | SB14R_04220 | P40431 | Negative | 954383 - 954763 | 13348.2 |
| (p)ppgpp synthetase | SB14R_04225 | P0AG25 | Negative | 954822 - 956981 | 80124.3 |
| dna-directed rna polymerase subunit omega | SB14R_04230 | A6VEE4 | Negative | 956985 - 957257 | 10100.8 |
| hypothetical protein | SB14R_04235 | Not Available | Negative | 957346 - 958674 | 48905.0 |
| hypothetical protein | SB14R_04240 | Q9I1L9 | Positive | 958966 - 959161 | 6853.13 |
| Trna-pro | Not Available | Not Available | Positive | 964061 - 964137 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





