Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain SB14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
944412 bp
Thymine Count
937132 bp
Guanine Count
1721206 bp
Cytosine Count
1742460 bp
Genome Length
5345210 bp
Protein-coding Genes
4612 genes
Non-Coding Genes
132 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease ph | SB14R_03995 | B7V5M5 | Positive | 900418 - 901140 | 25644.8 |
| orotate phosphoribosyltransferase | SB14R_04000 | Not Available | Positive | 901296 - 901658 | 13521.0 |
| membrane protein | SB14R_04005 | Not Available | Positive | 901946 - 903238 | 46829.3 |
| galactarate dehydrogenase | SB14R_04010 | P42240 | Negative | 903307 - 904863 | 55722.9 |
| gntr family transcriptional regulator | SB14R_04015 | Not Available | Negative | 905268 - 906305 | 36240.8 |
| threonine aldolase | SB14R_04020 | Q9HTF1 | Negative | 906633 - 907673 | 37672.5 |
| peptidase m24 | SB14R_04025 | Q8RY11 | Negative | 907670 - 909481 | 65017.7 |
| lysr family transcriptional regulator | SB14R_04030 | Not Available | Negative | 910172 - 911113 | 35218.5 |
| acr family transporter | SB14R_04035 | A8GHQ9 | Negative | 911327 - 914377 | 111880.0 |
| rnd transporter | SB14R_04040 | Not Available | Negative | 914374 - 915444 | 38790.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





