Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain SB14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
944412 bp
Thymine Count
937132 bp
Guanine Count
1721206 bp
Cytosine Count
1742460 bp
Genome Length
5345210 bp
Protein-coding Genes
4612 genes
Non-Coding Genes
132 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipopeptide | SB14R_03790 | P17323 | Positive | 850011 - 850136 | 4558.67 |
| diaminopimelate decarboxylase | SB14R_03795 | P19572 | Positive | 850146 - 851393 | 45122.1 |
| diaminopimelate epimerase | SB14R_03800 | B7V5G9 | Positive | 851406 - 852236 | 30222.6 |
| hypothetical protein | SB14R_03805 | Not Available | Positive | 852233 - 852919 | 25282.4 |
| recombinase xerc | SB14R_03810 | Q51566 | Positive | 852935 - 853828 | 33152.0 |
| had family hydrolase | SB14R_03815 | P0ADP0 | Positive | 853825 - 854535 | 26141.9 |
| pyridine nucleotide-disulfide oxidoreductase | SB14R_03820 | Not Available | Positive | 855447 - 856826 | 49332.1 |
| aminotransferase degt | SB14R_03825 | Q6U1I3 | Positive | 856871 - 858043 | 43687.3 |
| polysaccharide biosynthesis protein | SB14R_03830 | Not Available | Positive | 858063 - 859598 | 56594.6 |
| glycosyl transferase family 2 | SB14R_03835 | P9WLV4 | Positive | 859600 - 860535 | 36179.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





