Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain SB14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
944412 bp
Thymine Count
937132 bp
Guanine Count
1721206 bp
Cytosine Count
1742460 bp
Genome Length
5345210 bp
Protein-coding Genes
4612 genes
Non-Coding Genes
132 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| spovr family protein | SB14R_03335 | P29013 | Positive | 745995 - 747536 | 60427.4 |
| trna nucleotidyl transferase | SB14R_03340 | Q4K4W8 | Positive | 747588 - 748715 | 41324.8 |
| 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase | SB14R_03345 | Not Available | Negative | 748930 - 749463 | 19367.5 |
| dihydroneopterin aldolase | SB14R_03350 | P0AC17 | Negative | 749460 - 749813 | 13116.7 |
| glycerol-3-phosphate acyltransferase | SB14R_03355 | A6UZ84 | Positive | 749919 - 750488 | 20442.9 |
| ugmp family protein | SB14R_03360 | A6UZ83 | Negative | 750534 - 751559 | 36281.0 |
| 30s ribosomal protein s21 | SB14R_03365 | C1DIY4 | Positive | 751766 - 751981 | 8528.38 |
| dna primase | SB14R_03370 | P0A118 | Positive | 752145 - 754058 | 70701.4 |
| rna polymerase subunit sigma-70 | SB14R_03375 | P26480 | Positive | 754135 - 755991 | 69876.8 |
| Trna-met | Not Available | Not Available | Positive | 756096 - 756172 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





