Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain SB14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
944412 bp
Thymine Count
937132 bp
Guanine Count
1721206 bp
Cytosine Count
1742460 bp
Genome Length
5345210 bp
Protein-coding Genes
4612 genes
Non-Coding Genes
132 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| membrane protein | SB14R_03230 | P0AF81 | Negative | 723538 - 723975 | 15190.0 |
| hypothetical protein | SB14R_03235 | Not Available | Negative | 723991 - 724617 | 22914.2 |
| hypothetical protein | SB14R_03240 | Not Available | Negative | 724907 - 725605 | 25171.9 |
| hypothetical protein | SB14R_03245 | Not Available | Negative | 725617 - 726003 | 13525.2 |
| integrase | SB14R_03250 | Not Available | Negative | 726418 - 727356 | 35815.1 |
| hypothetical protein | SB14R_03255 | Not Available | Negative | 727440 - 728483 | 38519.9 |
| ribonucleotide-diphosphate reductase subunit beta | SB14R_03260 | Q9Z6S4 | Negative | 729982 - 731232 | 47474.1 |
| hypothetical protein | SB14R_03270 | Not Available | Positive | 731266 - 732201 | 33049.1 |
| molecular chaperone dnaj | SB14R_03275 | Q5PDE4 | Negative | 732176 - 732940 | 28088.8 |
| mannose-1-phosphate guanylyltransferase | SB14R_03280 | Q88QT2 | Negative | 732937 - 733602 | 23284.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





