Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain SB14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
944412 bp
Thymine Count
937132 bp
Guanine Count
1721206 bp
Cytosine Count
1742460 bp
Genome Length
5345210 bp
Protein-coding Genes
4612 genes
Non-Coding Genes
132 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| major facilitator transporter | SB14R_02975 | P0A2G4 | Negative | 673317 - 674597 | 44847.2 |
| phosphoadenylylsulfate reductase | SB14R_02980 | Q8PHC7 | Negative | 674655 - 675275 | 23125.6 |
| aminodeoxychorismate synthase | SB14R_02985 | P12679 | Negative | 675324 - 676667 | 48633.0 |
| gntr family transcriptional regulator | SB14R_02990 | O05494 | Positive | 676821 - 677522 | 26175.4 |
| 2-methylisocitrate lyase | SB14R_02995 | Q937P0 | Positive | 677527 - 678414 | 31769.1 |
| methylcitrate synthase | SB14R_03000 | Q8EJW2 | Positive | 678470 - 679597 | 41121.0 |
| 2-methylcitrate dehydratase | SB14R_03005 | P45859 | Positive | 679738 - 681222 | 55115.8 |
| hypothetical protein | SB14R_03010 | Not Available | Negative | 681339 - 681668 | 12547.7 |
| isocitrate lyase | SB14R_03015 | Q9I0K4 | Negative | 681695 - 683290 | 58443.3 |
| aldehyde-activating protein | SB14R_03020 | O14034 | Negative | 683950 - 684381 | 15594.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





