Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain SB14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
944412 bp
Thymine Count
937132 bp
Guanine Count
1721206 bp
Cytosine Count
1742460 bp
Genome Length
5345210 bp
Protein-coding Genes
4612 genes
Non-Coding Genes
132 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ketoglutarate semialdehyde dehydrogenase | SB14R_02925 | Q6FFQ0 | Positive | 657110 - 658687 | 55616.6 |
| aldose epimerase | SB14R_02930 | P05149 | Negative | 662100 - 663248 | 41407.8 |
| dihydroxy-acid dehydratase | SB14R_02935 | Q1JUQ1 | Negative | 663370 - 665109 | 62217.9 |
| arabinose abc transporter permease | SB14R_02940 | P0AE26 | Negative | 665193 - 666161 | 34129.2 |
| l-arabinose transporter atp-binding protein | SB14R_02945 | Q3K8M7 | Negative | 666203 - 667729 | 54670.8 |
| sugar abc transporter substrate-binding protein | SB14R_02950 | P02924 | Negative | 667947 - 668951 | 35818.9 |
| gluconolaconase | SB14R_02955 | P0DOV6 | Negative | 669170 - 670039 | 31535.1 |
| gntr family transcriptional regulator | SB14R_02960 | P31475 | Negative | 670301 - 670987 | 24671.6 |
| gntr family transcriptional regulator | SB14R_02965 | P39161 | Negative | 671016 - 671768 | 28133.7 |
| mfs transporter | SB14R_02970 | Not Available | Positive | 672034 - 673344 | 47463.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





