Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain SB14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
944412 bp
Thymine Count
937132 bp
Guanine Count
1721206 bp
Cytosine Count
1742460 bp
Genome Length
5345210 bp
Protein-coding Genes
4612 genes
Non-Coding Genes
132 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome o ubiquinol oxidase subunit i | SB14R_02555 | P0ABJ0 | Positive | 568212 - 570200 | 74112.5 |
| cytochrome o ubiquinol oxidase subunit iii | SB14R_02560 | P0ABJ4 | Positive | 570205 - 570819 | 22618.6 |
| cytochrome c oxidase | SB14R_02565 | P0ABJ7 | Positive | 570820 - 571158 | 12662.9 |
| protoheme ix farnesyltransferase | SB14R_02570 | B2VHR9 | Positive | 571173 - 572057 | 31434.2 |
| pilus assembly protein pily | SB14R_02575 | S0HPF7 | Negative | 572127 - 574130 | 70452.2 |
| hypothetical protein | SB14R_02580 | Not Available | Negative | 576041 - 576649 | 21063.3 |
| pilus assembly protein pilw | SB14R_02585 | Not Available | Negative | 576646 - 577440 | 28389.0 |
| pilus assembly protein pilv | SB14R_02590 | Not Available | Negative | 577444 - 578040 | 20929.4 |
| pilus assembly protein fimt | SB14R_02595 | Not Available | Negative | 578041 - 578574 | 18165.8 |
| Trna-lys | Not Available | Not Available | Positive | 578906 - 578979 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





