Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain SB14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
944412 bp
Thymine Count
937132 bp
Guanine Count
1721206 bp
Cytosine Count
1742460 bp
Genome Length
5345210 bp
Protein-coding Genes
4612 genes
Non-Coding Genes
132 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SB14R_02505 | Not Available | Positive | 559411 - 559908 | 17526.2 |
| dna gyrase inhibitor | SB14R_02510 | A6VBR6 | Negative | 559912 - 560109 | 7248.34 |
| dephospho-coa kinase | SB14R_02515 | O69082 | Negative | 560106 - 560717 | 21811.2 |
| methyltransferase | SB14R_02520 | Q9ZEL6 | Negative | 560714 - 561586 | 31556.5 |
| type ii secretion system protein f | SB14R_02525 | P22609 | Negative | 561586 - 562803 | 44192.7 |
| general secretion pathway protein gspe | SB14R_02530 | P22608 | Negative | 563002 - 564696 | 62384.5 |
| fimbrial protein | SB14R_02535 | Q07564 | Positive | 564911 - 565414 | 16832.1 |
| dehydrogenase | SB14R_02540 | Not Available | Negative | 565514 - 566512 | 35244.8 |
| Trna-thr | Not Available | Not Available | Positive | 566801 - 566876 | Not Available |
| ubiquinol oxidase subunit ii | SB14R_02550 | P0ABJ2 | Positive | 567285 - 568208 | 34002.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





