Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain SB14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
944412 bp
Thymine Count
937132 bp
Guanine Count
1721206 bp
Cytosine Count
1742460 bp
Genome Length
5345210 bp
Protein-coding Genes
4612 genes
Non-Coding Genes
132 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycine/betaine abc transporter substrate-binding protein | SB14R_02455 | Q9HXC4 | Negative | 539096 - 539998 | 33053.4 |
| glycine/betaine abc transporter permease | SB14R_02460 | Q8ZPK1 | Negative | 540008 - 540718 | 24679.4 |
| endoglucanase | SB14R_02465 | Not Available | Positive | 541928 - 542977 | 39618.6 |
| acyltransferase | SB14R_02470 | Not Available | Positive | 543265 - 544440 | 43600.2 |
| hypothetical protein | SB14R_02475 | Not Available | Positive | 544575 - 545657 | 40517.8 |
| peptide chain release factor 3 | SB14R_02480 | B7VBK5 | Positive | 546775 - 548358 | 59780.4 |
| dna polymerase v | SB14R_02485 | P0A2B8 | Negative | 548425 - 549990 | 59512.6 |
| exodeoxyribonuclease v subunit alpha | SB14R_02490 | P04993 | Negative | 550065 - 552146 | 75089.3 |
| exodeoxyribonuclease v subunit beta | SB14R_02495 | P08394 | Negative | 552139 - 555801 | 135739.0 |
| exodeoxyribonuclease v subunit gamma | SB14R_02500 | P07648 | Negative | 555798 - 559229 | 128098.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





