Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain SB14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
944412 bp
Thymine Count
937132 bp
Guanine Count
1721206 bp
Cytosine Count
1742460 bp
Genome Length
5345210 bp
Protein-coding Genes
4612 genes
Non-Coding Genes
132 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna-binding protein | SB14R_02405 | P0AGD9 | Negative | 529868 - 531247 | 49807.4 |
| cytochrome c assembly protein | SB14R_02410 | Not Available | Positive | 531384 - 532184 | 29360.3 |
| mfs transporter | SB14R_02415 | P37643 | Positive | 532374 - 533678 | 45861.8 |
| phosphoribosylglycinamide formyltransferase | SB14R_02420 | B7UYK0 | Negative | 533738 - 534919 | 42187.6 |
| fe-s protein | SB14R_02425 | Not Available | Negative | 534941 - 535138 | 7215.59 |
| dna mismatch repair protein mutt | SB14R_02430 | A4WBH1 | Negative | 535204 - 535812 | 22363.9 |
| adp-ribose pyrophosphatase | SB14R_02435 | P93740 | Positive | 535918 - 536472 | 20671.0 |
| erfk/ybis/ycfs/ynhg family protein | SB14R_02440 | Not Available | Positive | 536685 - 537221 | 20233.6 |
| glycine/betaine abc transporter atp-binding protein | SB14R_02445 | Q8ZPK4 | Negative | 537268 - 538422 | 42723.4 |
| choline abc transporter permease | SB14R_02450 | Q8ZPK3 | Negative | 538433 - 539092 | 23427.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





