Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain SB14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
944412 bp
Thymine Count
937132 bp
Guanine Count
1721206 bp
Cytosine Count
1742460 bp
Genome Length
5345210 bp
Protein-coding Genes
4612 genes
Non-Coding Genes
132 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| magnesium transporter cora | SB14R_02305 | Not Available | Negative | 508891 - 509898 | 37070.8 |
| lysyl-trna synthetase | SB14R_02310 | B7V0Z5 | Negative | 510173 - 511675 | 56905.9 |
| peptide chain release factor 2 | SB14R_02315 | Q3BUB7 | Negative | 511742 - 512644 | 33297.9 |
| major facilitator transporter | SB14R_02320 | Not Available | Negative | 512938 - 514560 | 58716.5 |
| choline dehydrogenase | SB14R_02325 | Q9WWW2 | Negative | 514656 - 516329 | 59959.0 |
| lysr family transcriptional regulator | SB14R_02330 | Not Available | Positive | 516472 - 517389 | 33904.9 |
| inner membrane protein yebe | SB14R_02335 | P33218 | Negative | 517393 - 518094 | 24538.3 |
| hypothetical protein | SB14R_02340 | Not Available | Positive | 518288 - 518758 | 17197.6 |
| oxidoreductase | SB14R_02345 | Q5KXG9 | Negative | 518804 - 519907 | 40315.9 |
| ssdna exonuclease recj | SB14R_02350 | P39693 | Negative | 520033 - 521754 | 62505.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





