Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain SB14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
944412 bp
Thymine Count
937132 bp
Guanine Count
1721206 bp
Cytosine Count
1742460 bp
Genome Length
5345210 bp
Protein-coding Genes
4612 genes
Non-Coding Genes
132 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hopj type iii effector protein | SB14R_01905 | Not Available | Positive | 424333 - 424671 | 12185.1 |
| udp-3-o-(3-hydroxymyristoyl) glucosamine n-acyltransferase | SB14R_01910 | A6VB79 | Negative | 424730 - 425644 | 33438.0 |
| cell division protein ftsz | SB14R_01915 | P47204 | Negative | 425754 - 426935 | 41079.4 |
| cell division protein ftsa | SB14R_01920 | P47203 | Negative | 426989 - 428233 | 44196.5 |
| cell division protein ftsq | SB14R_01925 | G3XDA7 | Negative | 428250 - 429101 | 32524.5 |
| udp-n-acetylmuramate--alanine ligase | SB14R_01930 | C1DQA0 | Negative | 429167 - 430627 | 52444.2 |
| udp-diphospho-muramoylpentapeptide beta-n- acetylglucosaminyltransferase | SB14R_01935 | B7UZJ0 | Negative | 430620 - 431690 | 37314.6 |
| cell division protein ftsw | SB14R_01940 | C3KCS9 | Negative | 431680 - 432882 | 44119.1 |
| udp-n-acetylmuramoyl-l-alanyl-d-glutamate synthetase | SB14R_01945 | Q88N78 | Negative | 432879 - 434168 | 46162.4 |
| phospho-n-acetylmuramoyl-pentapeptide- transferase | SB14R_01950 | A4VIH5 | Negative | 434228 - 435310 | 39689.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





