Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain SB14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
944412 bp
Thymine Count
937132 bp
Guanine Count
1721206 bp
Cytosine Count
1742460 bp
Genome Length
5345210 bp
Protein-coding Genes
4612 genes
Non-Coding Genes
132 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar abc transporter atpase | SB14R_01545 | Q3IX40 | Negative | 340468 - 341568 | 40009.3 |
| sugar abc transporter permease | SB14R_01550 | O58967 | Negative | 341580 - 342410 | 30208.7 |
| abc transporter permease | SB14R_01555 | O58968 | Negative | 342403 - 343320 | 33901.5 |
| sugar abc transporter substrate-binding protein | SB14R_01560 | O06875 | Negative | 343500 - 344762 | 45376.1 |
| histidine kinase | SB14R_01565 | Q9HZ47 | Negative | 344887 - 346335 | 54206.1 |
| chemotaxis protein chey | SB14R_01570 | G3XCY6 | Negative | 346325 - 347065 | 27439.2 |
| glucokinase | SB14R_01575 | A6V2N1 | Negative | 347169 - 348146 | 34910.8 |
| phosphogluconate dehydratase | SB14R_01580 | P31961 | Negative | 348143 - 349972 | 65417.9 |
| glyceraldehyde-3-phosphate dehydrogenase | SB14R_01585 | P27726 | Positive | 350107 - 351111 | 36173.1 |
| segregation and condensation protein b | SB14R_01590 | Q83CP9 | Negative | 351535 - 352278 | 27909.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





