Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain SB14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
944412 bp
Thymine Count
937132 bp
Guanine Count
1721206 bp
Cytosine Count
1742460 bp
Genome Length
5345210 bp
Protein-coding Genes
4612 genes
Non-Coding Genes
132 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Dna-binding protein | SB14R_07810 | Not Available | Positive | 1717520 - 1717750 | 8266.92 |
| Hypothetical protein | SB14R_07815 | Not Available | Positive | 1717802 - 1718098 | 10686.0 |
| hypothetical protein | SB14R_07820 | Not Available | Positive | 1718095 - 1718292 | 7281.65 |
| Hypothetical protein | SB14R_07825 | Not Available | Positive | 1718369 - 1718614 | 9474.37 |
| hypothetical protein | SB14R_07830 | Not Available | Positive | 1718611 - 1718832 | 8276.01 |
| Toprim domain-containing protein | SB14R_07835 | Not Available | Positive | 1718844 - 1721681 | 107289.0 |
| Attr | Not Available | Not Available | Positive | 1721653 - 1721667 | Not Available |
| alpa family transcriptional regulator | SB14R_07840 | Not Available | Positive | 1721768 - 1721971 | 7542.02 |
| Putative integrase family protein | SB14R_07845 | P06155 | Negative | 1721980 - 1723176 | 44994.8 |
| Ci repressor | SB14R_10320 | Not Available | Negative | 2294578 - 2295210 | 22568.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





