Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain SB14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
944412 bp
Thymine Count
937132 bp
Guanine Count
1721206 bp
Cytosine Count
1742460 bp
Genome Length
5345210 bp
Protein-coding Genes
4612 genes
Non-Coding Genes
132 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aspartate-semialdehyde dehydrogenase | SB14R_01495 | Q51344 | Negative | 329875 - 330987 | 40501.2 |
| 3-isopropylmalate dehydrogenase | SB14R_01500 | Q4KF05 | Negative | 331044 - 332126 | 38915.9 |
| sam-dependent methyltransferase | SB14R_01505 | P30866 | Negative | 332146 - 332910 | 28425.9 |
| 3-isopropylmalate dehydratase | SB14R_01510 | A6V2V4 | Negative | 332955 - 333599 | 23986.2 |
| isopropylmalate isomerase | SB14R_01515 | A6V2V3 | Negative | 333611 - 335035 | 50832.9 |
| lysr family transcriptional regulator | SB14R_01520 | P96194 | Positive | 335178 - 336053 | 32096.9 |
| hypothetical protein | SB14R_01525 | Not Available | Negative | 336312 - 336548 | 9028.27 |
| porin | SB14R_01530 | Q51485 | Negative | 336721 - 338121 | 51378.7 |
| n-acylglucosamine 2-epimerase | SB14R_01535 | F2JVT6 | Negative | 338184 - 339395 | 46878.5 |
| sugar kinase | SB14R_01540 | Q9C524 | Negative | 339436 - 340341 | 32682.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





