Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain SB14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
944412 bp
Thymine Count
937132 bp
Guanine Count
1721206 bp
Cytosine Count
1742460 bp
Genome Length
5345210 bp
Protein-coding Genes
4612 genes
Non-Coding Genes
132 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gdp-d-mannose dehydratase | SB14R_00825 | Q9JRN5 | Negative | 187420 - 188451 | 38683.3 |
| glycosyl transferase family 1 | SB14R_00830 | Not Available | Negative | 188462 - 192166 | 137420.0 |
| sugar abc transporter atp-binding protein | SB14R_00840 | Q07698 | Negative | 193797 - 195017 | 45015.0 |
| abc transporter | SB14R_00845 | Not Available | Negative | 195014 - 195808 | 29307.7 |
| asnc family transcriptional regulator | SB14R_00855 | Q8U1H7 | Negative | 198409 - 198867 | 16824.4 |
| hypothetical protein | SB14R_00860 | P76097 | Negative | 198927 - 200258 | 48760.0 |
| hypothetical protein | SB14R_00865 | Not Available | Negative | 200363 - 200611 | 8196.57 |
| hypothetical protein | SB14R_00870 | Not Available | Negative | 200683 - 200883 | 6559.8 |
| atpase | SB14R_00875 | Q9HU20 | Positive | 201080 - 202894 | 66957.5 |
| fis family transcriptional regulator | SB14R_00880 | Q9HU19 | Positive | 202926 - 204359 | 51798.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





