Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain SB14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
944412 bp
Thymine Count
937132 bp
Guanine Count
1721206 bp
Cytosine Count
1742460 bp
Genome Length
5345210 bp
Protein-coding Genes
4612 genes
Non-Coding Genes
132 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipoprotein | SB14R_00775 | Not Available | Negative | 175028 - 175372 | 12193.8 |
| Trna-thr | Not Available | Not Available | Positive | 175491 - 175566 | Not Available |
| hypothetical protein | SB14R_00785 | Not Available | Positive | 175729 - 177726 | 71780.1 |
| type i secretion protein tolc | SB14R_00790 | Not Available | Negative | 177784 - 179175 | 51085.7 |
| hemolysin secretion protein d | SB14R_00795 | Q7ANN5 | Negative | 179183 - 180502 | 48182.5 |
| peptidase | SB14R_00800 | Q03024 | Negative | 180499 - 182265 | 63359.0 |
| hypothetical protein | SB14R_00805 | Not Available | Negative | 183462 - 183641 | 6375.79 |
| group 1 glycosyl transferase | SB14R_00810 | Q9HTC0 | Positive | 184250 - 185356 | 41253.3 |
| glycosyl transferase family 1 | SB14R_00815 | Not Available | Negative | 185367 - 186503 | 41906.9 |
| epimerase | SB14R_00820 | Q6T1X6 | Negative | 186509 - 187405 | 32279.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





