Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain SB14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
944412 bp
Thymine Count
937132 bp
Guanine Count
1721206 bp
Cytosine Count
1742460 bp
Genome Length
5345210 bp
Protein-coding Genes
4612 genes
Non-Coding Genes
132 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xre family transcriptional regulator | SB14R_00615 | Not Available | Positive | 139789 - 140448 | 24607.7 |
| histidine kinase | SB14R_00620 | Not Available | Positive | 140445 - 141818 | 49991.7 |
| c4-dicarboxylate abc transporter | SB14R_00625 | P13632 | Positive | 141880 - 143217 | 48759.0 |
| mfs transporter | SB14R_00630 | Not Available | Positive | 143388 - 144695 | 47493.5 |
| hypothetical protein | SB14R_00635 | Not Available | Positive | 144870 - 145178 | 11391.2 |
| dna (cytosine-5-)-methyltransferase | SB14R_00640 | P45736 | Positive | 145619 - 145951 | 12931.5 |
| dna topoisomerase iii | SB14R_00645 | Q9KQF5 | Negative | 145938 - 147902 | 71550.3 |
| glycine cleavage system regulatory protein | SB14R_00650 | Not Available | Negative | 148356 - 149261 | 33619.2 |
| glutathione s-transferase | SB14R_00655 | Not Available | Positive | 149418 - 150032 | 22916.0 |
| glycine cleavage system protein t | SB14R_00660 | Q54DD3 | Negative | 150131 - 151240 | 39453.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





