Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain SB14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
944412 bp
Thymine Count
937132 bp
Guanine Count
1721206 bp
Cytosine Count
1742460 bp
Genome Length
5345210 bp
Protein-coding Genes
4612 genes
Non-Coding Genes
132 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| isocitrate dehydrogenase | SB14R_00320 | P16100 | Positive | 69953 - 72184 | 80711.8 |
| nudix hydrolase | SB14R_00325 | A7ZKS4 | Positive | 72314 - 72766 | 16813.1 |
| trna 2-thiouridylase | SB14R_00330 | B0KMQ6 | Positive | 72795 - 73877 | 39916.3 |
| dna repair protein | SB14R_00335 | Q4K9U1 | Positive | 73874 - 74494 | 22931.9 |
| adenylosuccinate lyase | SB14R_00340 | Q9I0K9 | Positive | 74582 - 75952 | 50460.4 |
| cupin | SB14R_00345 | P27431 | Positive | 76168 - 77343 | 44356.5 |
| hypothetical protein | SB14R_00350 | Not Available | Positive | 77358 - 77888 | 19816.0 |
| secretin | SB14R_00355 | Not Available | Positive | 77885 - 78646 | 27830.0 |
| nadh-quinone oxidoreductase subunit a | SB14R_00360 | Q02NC9 | Positive | 78905 - 79318 | 14970.5 |
| nadh dehydrogenase | SB14R_00365 | Q4K9T5 | Positive | 79329 - 80003 | 25343.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





