Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain SB14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
944412 bp
Thymine Count
937132 bp
Guanine Count
1721206 bp
Cytosine Count
1742460 bp
Genome Length
5345210 bp
Protein-coding Genes
4612 genes
Non-Coding Genes
132 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ohcu decarboxylase | SB14R_00240 | D8JBB8 | Positive | 54665 - 55177 | 18633.8 |
| allantoicase | SB14R_00245 | Q3KFK9 | Positive | 55201 - 56208 | 37609.2 |
| ureidoglycolate hydrolase | SB14R_00250 | Q48KS5 | Positive | 56205 - 56705 | 18453.8 |
| Ncrna_class:rnase_p_rna | Not Available | Not Available | Positive | 56993 - 57348 | Not Available |
| chemotaxis protein | SB14R_00255 | O68827 | Negative | 56702 - 57610 | 33140.3 |
| membrane protein | SB14R_00260 | O68826 | Negative | 57607 - 58458 | 30986.9 |
| hypothetical protein | SB14R_00265 | Not Available | Negative | 59657 - 60598 | 33429.9 |
| asnc family transcriptional regulator | SB14R_00270 | P42179 | Positive | 60727 - 61161 | 16100.7 |
| Ncrna_class:other | Not Available | Not Available | Positive | 61976 - 62046 | Not Available |
| Ncrna_class:other | Not Available | Not Available | Positive | 61990 - 62065 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





