Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain SB14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
944412 bp
Thymine Count
937132 bp
Guanine Count
1721206 bp
Cytosine Count
1742460 bp
Genome Length
5345210 bp
Protein-coding Genes
4612 genes
Non-Coding Genes
132 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SB14R_00055 | Not Available | Negative | 11903 - 12163 | 9296.22 |
| hypothetical protein | SB14R_00060 | Not Available | Negative | 12240 - 12431 | 6568.2 |
| cytochrome d terminal oxidase subunit 1 | SB14R_00065 | Q09049 | Positive | 12607 - 14220 | 59269.5 |
| 5s ribosomal rna | Not Available | Not Available | Positive | 13345 - 13441 | Not Available |
| cytochrome d ubiquinol oxidase subunit 2 | SB14R_00070 | P45020 | Positive | 14231 - 15370 | 41117.4 |
| Ncrna_class:other | Not Available | Not Available | Positive | 15192 - 15267 | Not Available |
| membrane protein | SB14R_00075 | Not Available | Positive | 15397 - 15513 | 4400.25 |
| cyd operon protein ybge | SB14R_00080 | Not Available | Positive | 15494 - 15796 | 10705.8 |
| chemotaxis protein | SB14R_00085 | Not Available | Positive | 16026 - 17987 | 69961.1 |
| tetr family transcriptional regulator | SB14R_00090 | Not Available | Negative | 18302 - 18949 | 23480.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





