Clostridiaceae bacterium BRH_c20a BRHa_1004319

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Clostridiaceae

Genus

Description

Clostridiaceae bacterium BRH_c20a, identified by the accession number LADT00000000.1, is a member of the Clostridiaceae family, which is known for its diverse group of anaerobic bacteria. This particular strain is characterized by having a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability in anaerobic environments. Clostridiaceae species are often found in various habitats, including soils, sediments, and the gastrointestinal tracts of animals, playing crucial roles in organic matter decomposition and nutrient cycling. The presence of a single replicon suggests that Clostridiaceae bacterium BRH_c20a may have a specific ecological niche or metabolic specialization, allowing it to thrive in particular conditions where other microorganisms might not. In summary, Clostridiaceae bacterium BRH_c20a presents a unique genomic feature with its single replicon, which may enhance its adaptability in anaerobic ecosystems. Understanding its role within the Clostridiaceae family can provide insights into its ecological functions, particularly in biogeochemical cycles where anaerobic bacteria are essential for breaking down complex organic materials.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Clostridiaceae bacterium BRH_c20a BRHa_1004319


Gene Summary

Adenine Count

1414837 bp

Thymine Count

1426426 bp

Guanine Count

820359 bp

Cytosine Count

851248 bp

Genome Length

4512870 bp

Protein-coding Genes

3868 genes

Non-Coding Genes

66 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
16s ribosomal rnaNot AvailableNot AvailablePositive142 - 1681Not Available
threonine synthaseVR72_00005Not AvailableNegative1 - 30511416.8
transketolaseVR72_00010Q58094Positive805 - 158428484.1
transketolaseVR72_00015Not AvailablePositive1653 - 260033932.5
23s ribosomal rnaNot AvailableNot AvailablePositive2207 - 5199Not Available
hypothetical proteinVR72_00020Not AvailableNegative2758 - 316515531.9
lysr family transcriptional regulatorVR72_00025A0T0V5Negative3234 - 413033287.5
5s ribosomal rnaNot AvailableNot AvailablePositive5260 - 5376Not Available
membrane proteinVR72_00030Not AvailableNegative4510 - 585646947.0
hypothetical proteinVR72_00040Not AvailableNegative7768 - 849626553.7

Displaying genes 1 – 10 of 3934 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

209 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000277keto-L-sorboseC6H12O6Chemical structure of keto-L-sorboseNot available
Average180.1559Da
Monoisotopic180.0633881Da
BASm0000344(2R,3S)-homoisocitrateC7H7O7Chemical structure of (2R,3S)-homoisocitrateNot available
Average203.128Da
Monoisotopic203.020823305Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm00007131,5-anhydro-D-fructoseC6H10O5Chemical structure of 1,5-anhydro-D-fructoseNot available
Average162.1406Da
Monoisotopic162.05282343Da
BASm0000719chloramphenicol 3-acetateC13H14Cl2N2O6Chemical structure of chloramphenicol 3-acetateNot available
Average365.16Da
Monoisotopic364.0228916Da
BASm0000837dimethylmaleateC6H6O4Chemical structure of dimethylmaleateNot available
Average142.111Da
Monoisotopic142.027705833Da

Displaying 1–10 of 209 metabolites

Health Effects

No health effects information available for this bacterium.