Mycolicibacterium obuense strain DSM 44075

Rod

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Mycobacteriaceae

Genus

Mycolicibacterium

Description

Mycolicibacterium obuense strain DSM 44075 is characterized as a rod-shaped bacterium. This species exhibits the presence of flagella, which suggests potential motility that could influence its ecological interactions and adaptability to various environments. The strain has a singular replicon, indicating a streamlined genomic organization that may facilitate efficient replication and maintenance of its genetic material. The strain is cataloged under the accession number JYNU00000000.1, providing a reference for researchers seeking to explore its genetic and functional characteristics further. The unique traits of Mycolicibacterium obuense, particularly its morphology and motility, are essential for understanding its role in microbial communities and its potential applications in biotechnology or medicine. Biologically, the presence of flagella may allow Mycolicibacterium obuense strain DSM 44075 to navigate through different substrates or environments, potentially influencing its ecological niche. This motility could enhance its ability to colonize specific habitats or compete with other microorganisms, underscoring its ecological significance. Understanding the characteristics of this strain could provide insights into its functional capabilities and interactions within microbial ecosystems.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyMycobacteriaceae
GenusMycolicibacterium
SpeciesMycolicibacterium obuense
Strainstrain DSM 44075

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Mycolicibacterium obuense strain DSM 44075


Gene Summary

Adenine Count

914801 bp

Thymine Count

914653 bp

Guanine Count

1932728 bp

Cytosine Count

1948345 bp

Genome Length

5710643 bp

Protein-coding Genes

5444 genes

Non-Coding Genes

51 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
multidrug resistance protein stpMOBUDSM44075_00001P9WG90Negative120 - 155648237.4
gdp-l-fucose synthaseMOBUDSM44075_00002Not AvailablePositive1671 - 304748780.6
putative oxidoreductaseMOBUDSM44075_00003O32291Positive3044 - 390430172.2
hypothetical proteinMOBUDSM44075_00004Not AvailablePositive4077 - 438811390.3
spermidine/putrescine import atp-binding protein potaMOBUDSM44075_00005P77795Positive4484 - 559339573.4
putrescine-binding periplasmic protein precursorMOBUDSM44075_00006P76108Positive5590 - 678042539.7
inner membrane abc transporter permease protein ydcuMOBUDSM44075_00007P77156Positive6780 - 761929883.4
inner membrane abc transporter permease protein ydcvMOBUDSM44075_00008P0AFR9Positive7620 - 842028389.2
gluconate 5-dehydrogenaseMOBUDSM44075_00009P37769Positive8438 - 920526459.6
2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylaseMOBUDSM44075_00010Q3S8R0Positive9215 - 1045644754.5

Displaying genes 1 – 10 of 5495 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

460 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm0000272(E)-4-coumarateC9H7O3Chemical structure of (E)-4-coumarateNot available
Average163.1501Da
Monoisotopic163.0395191Da
BASm0000277keto-L-sorboseC6H12O6Chemical structure of keto-L-sorboseNot available
Average180.1559Da
Monoisotopic180.0633881Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000399(S)-allantoinC4H6N4O3Chemical structure of (S)-allantoin97-59-6
Average158.1154Da
Monoisotopic158.0439901Da

Displaying 1–10 of 460 metabolites

Health Effects

No health effects information available for this bacterium.