Mycolicibacterium obuense strain DSM 44075

Rod

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Mycobacteriaceae

Genus

Mycolicibacterium

Description

Mycolicibacterium obuense strain DSM 44075 is characterized as a rod-shaped bacterium. This species exhibits the presence of flagella, which suggests potential motility that could influence its ecological interactions and adaptability to various environments. The strain has a singular replicon, indicating a streamlined genomic organization that may facilitate efficient replication and maintenance of its genetic material. The strain is cataloged under the accession number JYNU00000000.1, providing a reference for researchers seeking to explore its genetic and functional characteristics further. The unique traits of Mycolicibacterium obuense, particularly its morphology and motility, are essential for understanding its role in microbial communities and its potential applications in biotechnology or medicine. Biologically, the presence of flagella may allow Mycolicibacterium obuense strain DSM 44075 to navigate through different substrates or environments, potentially influencing its ecological niche. This motility could enhance its ability to colonize specific habitats or compete with other microorganisms, underscoring its ecological significance. Understanding the characteristics of this strain could provide insights into its functional capabilities and interactions within microbial ecosystems.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyMycobacteriaceae
GenusMycolicibacterium
SpeciesMycolicibacterium obuense
Strainstrain DSM 44075

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Mycolicibacterium obuense strain DSM 44075

Gene Summary

Adenine Count

914801 bp

Thymine Count

914653 bp

Guanine Count

1932728 bp

Cytosine Count

1948345 bp

Genome Length

5710643 bp

Protein-coding Genes

5444 genes

Non-Coding Genes

51 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinMOBUDSM44075_00319Not AvailablePositive348192 - 34877020193.7
(r)-benzylsuccinyl-coa dehydrogenaseMOBUDSM44075_00320Not AvailableNegative348767 - 35087874057.2
hth-type transcriptional repressor kstrMOBUDSM44075_00321A0R528Positive351095 - 35179025155.2
trehalose-6-phosphate phosphataseMOBUDSM44075_00322Not AvailablePositive351810 - 35255325300.7
manganese abc transporter substrate-binding lipoprotein precursorMOBUDSM44075_00323Not AvailablePositive352559 - 35344030200.4
hth-type transcriptional repressor purrMOBUDSM44075_00324Q8NMF0Negative353444 - 35454438900.6
high-affinity zinc uptake system membrane protein znubMOBUDSM44075_00325P31309Negative354489 - 35543332651.5
zinc import atp-binding protein znucMOBUDSM44075_00326P96117Negative355430 - 35621528078.7
high-affinity zinc uptake system binding-protein znua precursorMOBUDSM44075_00327Not AvailableNegative356202 - 35727836883.6
putative metal chaperone ycicMOBUDSM44075_00328P94400Positive357285 - 35843341487.2

Displaying genes 321 – 330 of 5495 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

460 records
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Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm0000272(E)-4-coumarateC9H7O3Chemical structure of (E)-4-coumarateNot available
Average163.1501Da
Monoisotopic163.0395191Da
BASm0000277keto-L-sorboseC6H12O6Chemical structure of keto-L-sorboseNot available
Average180.1559Da
Monoisotopic180.0633881Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000399(S)-allantoinC4H6N4O3Chemical structure of (S)-allantoin97-59-6
Average158.1154Da
Monoisotopic158.0439901Da

Displaying 1–10 of 460 metabolites

Health Effects

No health effects information available for this bacterium.