Candidatus Synechococcus spongiarum 15L

Gram-negative

Kingdom

Bacillati

Phylum

Cyanobacteriota

Class

Cyanophyceae

Order

Synechococcales

Family

Synechococcaceae

Genus

Synechococcus

Description

Candidatus Synechococcus spongiarum 15L is a Gram-negative bacterium characterized by the presence of flagella, which may contribute to its motility and environmental adaptability. This organism possesses a single replicon, indicating a streamlined genomic structure that may reflect its ecological niche or evolutionary adaptations. The genomic information for Candidatus Synechococcus spongiarum 15L is accessible under the accession number JYFQ00000000.1. The flagella presence suggests that this bacterium is potentially capable of active movement in aquatic environments, which can be advantageous for nutrient acquisition and colonization of specific habitats. As a member of the Synechococcus genus, it is likely involved in photosynthetic processes, contributing to primary production in its ecosystem. Understanding the traits of Candidatus Synechococcus spongiarum 15L enhances our comprehension of its ecological role, particularly in aquatic environments where it may interact with other microorganisms and contribute to biogeochemical cycles. Its single replicon structure might also indicate a level of genomic efficiency that allows it to thrive in specific ecological niches. Overall, the traits of this bacterium underscore its significance in microbial ecology, particularly concerning its adaptability and functional contributions to its environment.

Taxonomy

KingdomBacillati
PhylumCyanobacteriota
ClassCyanophyceae
OrderSynechococcales
FamilySynechococcaceae
GenusSynechococcus
SpeciesCandidatus Synechococcus spongiarum
Strain15L

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Candidatus Synechococcus spongiarum 15L
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Candidatus Synechococcus spongiarum 15L


Gene Summary

Adenine Count

447423 bp

Thymine Count

448007 bp

Guanine Count

648635 bp

Cytosine Count

648300 bp

Genome Length

2209101 bp

Protein-coding Genes

1878 genes

Non-Coding Genes

43 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
23s ribosomal rnaNot AvailableNot AvailablePositive3 - 2881Not Available
5s ribosomal rnaNot AvailableNot AvailablePositive148 - 264Not Available
Trna-alaNot AvailableNot AvailablePositive3021 - 3093Not Available
Trna-ileNot AvailableNot AvailablePositive3100 - 3176Not Available
16s ribosomal rnaNot AvailableNot AvailablePositive3327 - 4810Not Available
dna methylaseTQ37_00030P23192Negative6479 - 746838066.6
dead/deah box helicaseTQ37_00035B9DFG3Positive7752 - 10532102218.0
Ncrna_class:rnase_p_rnaNot AvailableNot AvailablePositive9282 - 9684Not Available
hypothetical proteinTQ37_00040Not AvailableNegative10789 - 110499380.03
phosphoglucomutaseTQ37_00045P39671Positive11245 - 1290659023.0

Displaying genes 1 – 10 of 1921 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

123 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000430hercynineC9H15N3O2Chemical structure of hercynineNot available
Average197.238Da
Monoisotopic197.1164267Da
BASm0000642S-adenosyl-4-methylsulfanyl-2-oxobutanoateC15H19N5O6SChemical structure of S-adenosyl-4-methylsulfanyl-2-oxobutanoateNot available
Average397.406Da
Monoisotopic397.105604055Da
BASm00007164-methylsulfanyl-2-oxobutanoateC5H7O3SChemical structure of 4-methylsulfanyl-2-oxobutanoateNot available
Average147.17Da
Monoisotopic147.012138839Da
BASm00008763-hydroxypyruvateC3H3O4Chemical structure of 3-hydroxypyruvateNot available
Average103.054Da
Monoisotopic103.003682157Da
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da

Displaying 1–10 of 123 metabolites

Health Effects

No health effects information available for this bacterium.