Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter lusitanus |
| Strain | strain NL19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1822156 bp
Thymine Count
1827867 bp
Guanine Count
1166337 bp
Cytosine Count
1171827 bp
Genome Length
5988187 bp
Protein-coding Genes
4579 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 1-hydroxy-2-methyl-2-(e)-butenyl 4-diphosphate synthase | TH53_24420 | Not Available | Positive | 5582171 - 5584129 | 72764.2 |
| hydrolase | TH53_24425 | Not Available | Negative | 5584156 - 5584986 | 30841.7 |
| serine carboxypeptidase | TH53_24430 | Not Available | Positive | 5585159 - 5586385 | 46903.0 |
| porphobilinogen deaminase | TH53_24435 | Not Available | Positive | 5586544 - 5588127 | 59241.9 |
| delta-aminolevulinic acid dehydratase | TH53_24440 | Not Available | Positive | 5588143 - 5589111 | 36086.5 |
| glutamate-1-semialdehyde aminotransferase | TH53_24445 | Not Available | Positive | 5589158 - 5590486 | 48132.9 |
| sodium:proton antiporter | TH53_24455 | Not Available | Negative | 5592052 - 5593272 | 43441.0 |
| tat pathway signal protein | TH53_24460 | Not Available | Positive | 5593474 - 5594892 | 53880.8 |
| hypothetical protein | TH53_24465 | Not Available | Positive | 5594966 - 5595175 | 7415.63 |
| hypothetical protein | TH53_24470 | Not Available | Negative | 5595226 - 5595954 | 26416.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
