Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter lusitanus |
| Strain | strain NL19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1822156 bp
Thymine Count
1827867 bp
Guanine Count
1166337 bp
Cytosine Count
1171827 bp
Genome Length
5988187 bp
Protein-coding Genes
4579 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s16 | TH53_17285 | Not Available | Positive | 3986351 - 3986917 | 20664.4 |
| 16s rrna processing protein rimm | TH53_17290 | Not Available | Positive | 3987007 - 3987534 | 20079.9 |
| trna (guanine-n1)-methyltransferase | TH53_17295 | Not Available | Positive | 3987546 - 3988223 | 25107.1 |
| hypothetical protein | TH53_17300 | Not Available | Positive | 3988385 - 3988657 | 10587.0 |
| 50s ribosomal protein l19 | TH53_17305 | Not Available | Positive | 3988823 - 3989170 | 13062.9 |
| phosphatidylserine decarboxylase | TH53_17310 | Not Available | Negative | 3989541 - 3990200 | 24804.2 |
| hypoxanthine phosphoribosyltransferase | TH53_17315 | Not Available | Negative | 3990266 - 3990808 | 20382.8 |
| penicillin-binding protein | TH53_17320 | Not Available | Negative | 3990828 - 3992975 | 80951.3 |
| atp-binding protein | TH53_17325 | Not Available | Positive | 3993094 - 3994170 | 38660.0 |
| nitrogen fixation protein nifu | TH53_17330 | Not Available | Positive | 3994203 - 3994448 | 8810.84 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
