Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter lusitanus |
| Strain | strain NL19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1822156 bp
Thymine Count
1827867 bp
Guanine Count
1166337 bp
Cytosine Count
1171827 bp
Genome Length
5988187 bp
Protein-coding Genes
4579 genes
Non-Coding Genes
81 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ornithine cyclodeaminase | TH53_09695 | Not Available | Negative | 2263434 - 2264405 | 36356.8 |
| pyridoxal-5'-phosphate-dependent protein subunit beta | TH53_09700 | Not Available | Negative | 2264423 - 2265397 | 35753.7 |
| hypothetical protein | TH53_09705 | Not Available | Negative | 2265433 - 2266527 | 42354.1 |
| alpha-l-fucosidase | TH53_09710 | Not Available | Negative | 2267066 - 2269450 | 88428.3 |
| hypothetical protein | TH53_09715 | Not Available | Positive | 2270279 - 2271745 | 56152.6 |
| hypothetical protein | TH53_09720 | Not Available | Negative | 2271774 - 2272199 | 15888.2 |
| chromosomal replication initiation protein | TH53_09725 | Not Available | Negative | 2272221 - 2273657 | 53803.8 |
| hypothetical protein | TH53_09730 | Not Available | Positive | 2274235 - 2274993 | 28496.3 |
| polyketide cyclase | TH53_09735 | Not Available | Positive | 2275015 - 2275443 | 16076.5 |
| hypothetical protein | TH53_09740 | Not Available | Negative | 2275469 - 2276497 | 39305.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
