Flavobacterium beibuense strain RSKm HC5

Rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Flavobacterium

Description

Flavobacterium beibuense strain RSKm HC5 is characterized as a rod-shaped bacterium that possesses flagella, indicating its potential for motility. This strain has been documented with a single replicon, suggesting a simpler genomic structure compared to other bacteria that may possess multiple replicons. The genomic data for this strain is available under the accession number JUIW00000000.1, which allows for further exploration and analysis within microbial databases. The presence of flagella in Flavobacterium beibuense strain RSKm HC5 may play a significant role in its ecological interactions, enabling it to navigate through various aquatic environments. This motility can facilitate nutrient acquisition and influence its distribution within microbial communities. Rod-shaped bacteria like this strain are commonly found in diverse habitats, often contributing to the decomposition of organic materials and nutrient cycling. In summary, Flavobacterium beibuense strain RSKm HC5 exhibits key traits such as its rod shape, motility due to flagella, and a single replicon structure. These features may enhance its ecological role in aquatic ecosystems, particularly in processes related to organic matter degradation and nutrient dynamics. Understanding the specific functions and interactions of this strain can provide insights into its contributions to microbial diversity and ecosystem health.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusFlavobacterium
SpeciesFlavobacterium beibuense
Strainstrain RSKm HC5

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Flavobacterium beibuense strain RSKm HC5
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Flavobacterium beibuense strain RSKm HC5 RSKm_HC5_contig21, whole

Gene Summary

Adenine Count

1141921 bp

Thymine Count

1165617 bp

Guanine Count

731732 bp

Cytosine Count

678518 bp

Genome Length

3717788 bp

Protein-coding Genes

3447 genes

Non-Coding Genes

45 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lyttr family two component transcriptional regulatorNU09_0008Not AvailablePositive8243 - 896527519.9
hypothetical proteinNU09_0009Not AvailablePositive9155 - 93346074.2
putative signal transduction histidine kinaseNU09_0010Not AvailablePositive9397 - 1142478125.1
glu/leu/phe/val dehydrogenaseNU09_0011Not AvailablePositive11492 - 1271844909.9
bifunctional protein : folylpolyglutamate synthase and dihydrofolate synthaseNU09_0012Not AvailablePositive12744 - 1399146703.3
Trna-valNot AvailableNot AvailablePositive14084 - 14158Not Available
site-specific recombinaseNU09_0013Not AvailableNegative14149 - 1567259021.1
hypothetical proteinNU09_0014Not AvailablePositive16079 - 1696334770.1
relaxase/mobilization nuclease family proteinNU09_0015Not AvailableNegative17202 - 1847347271.1
hypothetical proteinNU09_0016Not AvailableNegative18477 - 1890816178.8

Displaying genes 11 – 20 of 3492 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.