Flavobacterium subsaxonicum WB 4.1-42 = DSM 21790 strain WB 4.1-42

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Flavobacterium

Description

Flavobacterium subsaxonicum WB 4.1-42, also designated as DSM 21790, is a Gram-negative, aerobic bacterium characterized by its rod-shaped morphology. This strain is non-motile, despite the presence of flagella, indicating that it does not exhibit movement through flagellar propulsion. The optimal growth temperature for this strain is 25°C, positioning it within the mesophilic temperature range, which typically encompasses organisms that thrive at moderate temperatures. The genomic information for Flavobacterium subsaxonicum WB 4.1-42 is cataloged under the accession number JRLY00000000.1. Notably, this strain harbors a single replicon, suggesting a streamlined genomic organization that may be associated with its ecological niche. In terms of ecological insights, the characteristics of Flavobacterium subsaxonicum WB 4.1-42 imply its potential role in environments where organic matter decomposition occurs, particularly in aquatic systems where mesophilic conditions prevail. Its aerobic nature suggests involvement in processes that require oxygen, which is typical for bacteria that contribute to the cycling of nutrients in their habitats. Overall, the traits of this bacterium highlight its adaptation to specific ecological roles within its environment.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusFlavobacterium
SpeciesFlavobacterium subsaxonicum
StrainWB 4.1-42 = DSM 21790 strain WB 4.1-42

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceYes
Number of membranesNot Available
Image of Flavobacterium subsaxonicum WB 4.1-42 = DSM 21790 strain WB 4.1-42
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature25
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Flavobacterium subsaxonicum WB 4.1-42 = DSM 21790 strain WB 4.1-42

Gene Summary

Adenine Count

1357249 bp

Thymine Count

1349420 bp

Guanine Count

969734 bp

Cytosine Count

960771 bp

Genome Length

4637174 bp

Protein-coding Genes

3785 genes

Non-Coding Genes

44 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
glutamyl-trna amidotransferaseQ766_14250Not AvailableNegative3066878 - 306732716235.7
cell division protein ftszQ766_14255Not AvailableNegative3067417 - 306941172990.4
cell division protein ftsaQ766_14260Not AvailableNegative3069424 - 307083951201.5
cell division protein ftsqQ766_14265Not AvailableNegative3070845 - 307156727330.4
udp-n-acetylmuramate--alanine ligaseQ766_14270Not AvailableNegative3071554 - 307290349601.3
udp-diphospho-muramoylpentapeptide beta-n-acetylglucosaminyltransferaseQ766_14275Not AvailableNegative3073010 - 307410440165.0
cell division protein ftswQ766_14280Not AvailableNegative3074202 - 307551548440.4
udp-n-acetylmuramoylalanine--d-glutamate ligaseQ766_14285Not AvailableNegative3075553 - 307688448821.9
phospho-n-acetylmuramoyl-pentapeptide- transferaseQ766_14290Not AvailableNegative3076887 - 307811645429.3
udp-n-acetylmuramoylalanyl-d-glutamate--2, 6-diaminopimelate ligaseQ766_14295Not AvailableNegative3078122 - 307958553632.4

Displaying genes 2571 – 2580 of 3829 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.