Flavobacterium subsaxonicum WB 4.1-42 = DSM 21790 strain WB 4.1-42

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Flavobacterium

Description

Flavobacterium subsaxonicum WB 4.1-42, also designated as DSM 21790, is a Gram-negative, aerobic bacterium characterized by its rod-shaped morphology. This strain is non-motile, despite the presence of flagella, indicating that it does not exhibit movement through flagellar propulsion. The optimal growth temperature for this strain is 25°C, positioning it within the mesophilic temperature range, which typically encompasses organisms that thrive at moderate temperatures. The genomic information for Flavobacterium subsaxonicum WB 4.1-42 is cataloged under the accession number JRLY00000000.1. Notably, this strain harbors a single replicon, suggesting a streamlined genomic organization that may be associated with its ecological niche. In terms of ecological insights, the characteristics of Flavobacterium subsaxonicum WB 4.1-42 imply its potential role in environments where organic matter decomposition occurs, particularly in aquatic systems where mesophilic conditions prevail. Its aerobic nature suggests involvement in processes that require oxygen, which is typical for bacteria that contribute to the cycling of nutrients in their habitats. Overall, the traits of this bacterium highlight its adaptation to specific ecological roles within its environment.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusFlavobacterium
SpeciesFlavobacterium subsaxonicum
StrainWB 4.1-42 = DSM 21790 strain WB 4.1-42

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceYes
Number of membranesNot Available
Image of Flavobacterium subsaxonicum WB 4.1-42 = DSM 21790 strain WB 4.1-42
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature25
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Flavobacterium subsaxonicum WB 4.1-42 = DSM 21790 strain WB 4.1-42

Gene Summary

Adenine Count

1357249 bp

Thymine Count

1349420 bp

Guanine Count

969734 bp

Cytosine Count

960771 bp

Genome Length

4637174 bp

Protein-coding Genes

3785 genes

Non-Coding Genes

44 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
heat-shock proteinQ766_08870Not AvailablePositive1931539 - 193220725722.6
abc transporterQ766_08875Not AvailablePositive1932212 - 193354650724.9
hypothetical proteinQ766_08880Not AvailableNegative1933681 - 193434025115.2
isopentenyl-diphosphate delta-isomeraseQ766_08885Not AvailablePositive1934516 - 193504320720.6
6-pyruvoyl tetrahydrobiopterin synthaseQ766_08890Not AvailablePositive1935166 - 193557615699.5
mannose-6-phosphate isomeraseQ766_08895Not AvailablePositive1935583 - 193655136306.9
hypothetical proteinQ766_08900Not AvailablePositive1936607 - 19368739673.7
Trna-thrNot AvailableNot AvailablePositive1936954 - 1937030Not Available
nucleosidaseQ766_08910Not AvailablePositive1937105 - 193770721800.4
hypothetical proteinQ766_08915Not AvailableNegative1937781 - 193822717195.6

Displaying genes 1591 – 1600 of 3829 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.