Flavobacterium subsaxonicum WB 4.1-42 = DSM 21790 strain WB 4.1-42

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Flavobacterium

Description

Flavobacterium subsaxonicum WB 4.1-42, also designated as DSM 21790, is a Gram-negative, aerobic bacterium characterized by its rod-shaped morphology. This strain is non-motile, despite the presence of flagella, indicating that it does not exhibit movement through flagellar propulsion. The optimal growth temperature for this strain is 25°C, positioning it within the mesophilic temperature range, which typically encompasses organisms that thrive at moderate temperatures. The genomic information for Flavobacterium subsaxonicum WB 4.1-42 is cataloged under the accession number JRLY00000000.1. Notably, this strain harbors a single replicon, suggesting a streamlined genomic organization that may be associated with its ecological niche. In terms of ecological insights, the characteristics of Flavobacterium subsaxonicum WB 4.1-42 imply its potential role in environments where organic matter decomposition occurs, particularly in aquatic systems where mesophilic conditions prevail. Its aerobic nature suggests involvement in processes that require oxygen, which is typical for bacteria that contribute to the cycling of nutrients in their habitats. Overall, the traits of this bacterium highlight its adaptation to specific ecological roles within its environment.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusFlavobacterium
SpeciesFlavobacterium subsaxonicum
StrainWB 4.1-42 = DSM 21790 strain WB 4.1-42

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceYes
Number of membranesNot Available
Image of Flavobacterium subsaxonicum WB 4.1-42 = DSM 21790 strain WB 4.1-42
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature25
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Flavobacterium subsaxonicum WB 4.1-42 = DSM 21790 strain WB 4.1-42

Gene Summary

Adenine Count

1357249 bp

Thymine Count

1349420 bp

Guanine Count

969734 bp

Cytosine Count

960771 bp

Genome Length

4637174 bp

Protein-coding Genes

3785 genes

Non-Coding Genes

44 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
30s ribosomal protein s11Q766_08415Not AvailablePositive1836232 - 183661513718.7
30s ribosomal protein s4Q766_08420Not AvailablePositive1836701 - 183730622852.4
dna-directed rna polymerase subunit alphaQ766_08425Not AvailablePositive1837327 - 183831937561.1
50s ribosomal protein l17Q766_08430Not AvailablePositive1838359 - 183886818833.6
carbamoyl phosphate synthase small subunitQ766_08435Not AvailablePositive1839041 - 184015641251.8
enolaseQ766_08440Not AvailablePositive1840192 - 184148746109.9
hypothetical proteinQ766_08445Not AvailablePositive1841705 - 184367574358.3
lyttr family two component system response regulatory proteinQ766_08450Not AvailablePositive1843677 - 184443828761.8
hypothetical proteinQ766_08455Not AvailablePositive1844537 - 184648670267.0
hypothetical proteinQ766_08460Not AvailablePositive1846645 - 184909889639.4

Displaying genes 1511 – 1520 of 3829 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.