Escherichia coli 5-366-08_S1_C1

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain 5-366-08_S1_C1 is a gram-negative bacterium characterized by its rod shape and mobility, facilitated by the presence of flagella. This strain is classified as a facultative anaerobe, allowing it to thrive in both aerobic and anaerobic environments. It typically exists in pairs or as single cells and is associated with host organisms, indicating a potential symbiotic or commensal relationship. The optimal growth temperature for E. coli 5-366-08_S1_C1 is 37°C, which falls within the mesophilic temperature range. This temperature preference aligns with the typical conditions found in the intestines of warm-blooded hosts, where many E. coli strains are commonly found. The strain possesses a single replicon and is surrounded by two membranes, a characteristic feature of gram-negative bacteria. Its free-living biotic relationship suggests that while it may be associated with hosts, it can also survive independently in various environments. Understanding the traits of E. coli 5-366-08_S1_C1 offers insights into its ecological roles, particularly in host-associated environments. Its ability to adapt to varying oxygen levels and its optimal growth temperature indicate its versatility and potential contributions to microbial communities within host organisms, as well as its implications for human health and disease. The accession number for this strain is JOQU00000000.1, allowing for further research and exploration of its genetic and functional characteristics.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
Strain5-366-08_S1_C1

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli 5-366-08_S1_C1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Escherichia coli 5-366-08_S1_C1


Gene Summary

Adenine Count

1344186 bp

Thymine Count

1347041 bp

Guanine Count

1397804 bp

Cytosine Count

1357304 bp

Genome Length

5446335 bp

Protein-coding Genes

5124 genes

Non-Coding Genes

540 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Tail componentAB08_0001Not AvailablePositive1 - 108939131.1
Trna-val;Not AvailableNot AvailablePositive7 - 82Not Available
Trna-lys;Not AvailableNot AvailablePositive86 - 161Not Available
Trna-met;Not AvailableNot AvailablePositive99 - 175Not Available
Trna-gln;Not AvailableNot AvailablePositive118 - 192Not Available
Trna-val;Not AvailableNot AvailablePositive80 - 155Not Available
Trna-met;Not AvailableNot AvailablePositive208 - 284Not Available
Trna-ile;Not AvailableNot AvailablePositive261 - 337Not Available
Trna-val;Not AvailableNot AvailablePositive202 - 277Not Available
Trna-lys;Not AvailableNot AvailablePositive308 - 383Not Available

Displaying genes 1 – 10 of 5664 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.