Escherichia coli 2-210-07_S3_C3

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain 2-210-07_S3_C3 is a Gram-negative, rod-shaped bacterium that exhibits a facultative anaerobic metabolism, allowing it to thrive in both aerobic and anaerobic environments. This strain is characterized by its mobility, facilitated by the presence of flagella, and it typically appears in pairs or singles. E. coli 2-210-07_S3_C3 is mesophilic, with an optimal growth temperature of 37°C, which aligns with the typical body temperature of warm-blooded hosts. Its habitat is primarily host-associated, indicating a potential relationship with a living organism, although it is also described as free-living. This suggests that while it can inhabit specific hosts, it is capable of surviving independently in appropriate environments. With a single replicon and a double membrane structure, this strain fits within the general characteristics of E. coli. The ability to exist in a host-associated environment while also being free-living suggests ecological versatility, allowing it to adapt to varying conditions and potentially engage in diverse interactions within microbial communities. These traits highlight the adaptability of E. coli strains like 2-210-07_S3_C3, emphasizing their significant role in both health and disease within their ecological niches. The accessions provided for this strain are recorded as JNQA00000000.1, which can be referenced for further genomic and phenotypic studies.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
Strain2-210-07_S3_C3

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli 2-210-07_S3_C3
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Escherichia coli 2-210-07_S3_C3


Gene Summary

Adenine Count

1339035 bp

Thymine Count

1329487 bp

Guanine Count

1359528 bp

Cytosine Count

1366202 bp

Genome Length

5394252 bp

Protein-coding Genes

5648 genes

Non-Coding Genes

348 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
AttlNot AvailableNot AvailablePositive506230 - 506241Not Available
Cp4-57 prophageAC45_0534Not AvailablePositive506521 - 50776246831.4
hypothetical proteinAC45_0535Not AvailablePositive507861 - 5080918661.54
prophage cp4-57 regulatory family proteinAC45_0536Not AvailablePositive508259 - 5084657974.62
hypothetical proteinAC45_0537Not AvailablePositive508480 - 50920226530.5
hypothetical proteinAC45_0538Not AvailablePositive509262 - 5094085330.45
hypothetical proteinAC45_0539Not AvailablePositive509401 - 5095866557.95
Hypothetical proteinAC45_0540Not AvailablePositive509586 - 5097777108.55
hypothetical proteinAC45_0541Not AvailablePositive509767 - 5100098645.2
hypothetical proteinAC45_0542Not AvailableNegative510036 - 5101493942.75

Displaying genes 1 – 10 of 5996 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

4785 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000173(R)-3-Hydroxybutyric acidC4H8O3Chemical structure of (R)-3-Hydroxybutyric acid625-72-3
Average104.0473Da
Monoisotopic104.047344122Da
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000238(R)-3-phenyllactateC9H9O3Chemical structure of (R)-3-phenyllactateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm00002482,3-dihydroxy-3-methylbutanoateC5H10O4Chemical structure of 2,3-dihydroxy-3-methylbutanoate1756-18-9
Average134.1305Da
Monoisotopic134.0579088Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da

Displaying 1–10 of 4785 metabolites

Health Effects

No health effects information available for this bacterium.