Flavobacterium seoulense strain EM1321

Rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Flavobacterium

Description

Flavobacterium seoulense strain EM1321 is a Gram-negative, aerobic bacterium characterized by its rod-shaped morphology and the presence of flagella, which facilitate motility. This strain is notable for having a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability in various environments. The strain is cataloged under the accession number JNCA00000000.1, which provides a reference for genetic and genomic studies. The aerobic nature of Flavobacterium seoulense suggests that it thrives in oxygen-rich environments, potentially playing a significant role in the decomposition of organic materials and the cycling of nutrients in its ecological niche. Understanding the traits of Flavobacterium seoulense strain EM1321 can offer insights into its ecological role, particularly in environments where aerobic decomposition processes are crucial. Through its metabolic activities, this bacterium may contribute to the maintenance of ecosystem health by facilitating the breakdown of organic matter, thereby influencing nutrient availability for other organisms in its habitat.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusFlavobacterium
SpeciesFlavobacterium seoulense
Strainstrain EM1321

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Flavobacterium seoulense strain EM1321
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Flavobacterium seoulense strain EM1321 contig00056, whole genome

Gene Summary

Adenine Count

1267355 bp

Thymine Count

1264242 bp

Guanine Count

639317 bp

Cytosine Count

621726 bp

Genome Length

3792640 bp

Protein-coding Genes

3230 genes

Non-Coding Genes

53 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cell envelope biogenesis protein ompaFEM21_00590Not AvailableNegative98240 - 9918134662.5
exodeoxyribonuclease iiiFEM21_00600Not AvailableNegative99250 - 10001429395.3
glycerol acyltransferaseFEM21_00610Not AvailablePositive100156 - 10195869362.4
hypothetical proteinFEM21_00620Not AvailableNegative102023 - 10230410782.1
hypothetical proteinFEM21_00630Not AvailableNegative102401 - 10291618767.3
hypothetical proteinFEM21_00640Not AvailableNegative103006 - 10395035454.2
alpha-n-arabinofuranosidaseFEM21_00650Not AvailablePositive104440 - 10554041930.2
pyrroline-5-carboxylate reductaseFEM21_00660Not AvailableNegative105617 - 10639627605.7
magnesium transporterFEM21_00670Not AvailableNegative106425 - 10778050046.8
16s rrna methyltransferaseFEM21_00680Not AvailableNegative107770 - 10854929844.1

Displaying genes 61 – 70 of 3283 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.