Escherichia coli O121:H19 str. 2010C-3609

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli O121:H19 str. 2010C-3609 is a Gram-negative bacterium characterized by its rod shape and mobility, attributed to the presence of flagella. This strain is categorized as a facultative anaerobe, allowing it to thrive in both aerobic and anaerobic environments. It typically resides in host-associated habitats, indicating a strong relationship with living organisms. The optimal growth temperature for E. coli O121:H19 str. 2010C-3609 is 37°C, which falls within the mesophilic temperature range. This suggests that the bacterium is well-adapted to the physiological temperatures of warm-blooded hosts, where it can perform various biological functions. The organism possesses a single replicon and features a double membrane structure, a characteristic common to Gram-negative bacteria. This strain's biotic relationship is classified as free-living, indicating that it can exist independently in its environment while also being associated with hosts. The combination of its adaptability, mobility, and mesophilic nature allows E. coli O121:H19 str. 2010C-3609 to occupy diverse ecological niches, potentially influencing microbial dynamics in both host and environmental ecosystems. In summary, E. coli O121:H19 str. 2010C-3609 exemplifies the versatility of E. coli strains, showcasing how their physiological traits enable them to thrive in various habitats and potentially impact host health and microbial communities. The strain is documented under accession number JHFM00000000.1.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
StrainO121:H19 2010C-3609

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli O121:H19 str. 2010C-3609
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Escherichia coli O121:H19 str. 2010C-3609


Gene Summary

Adenine Count

1300600 bp

Thymine Count

1305179 bp

Guanine Count

1322489 bp

Cytosine Count

1317242 bp

Genome Length

5254495 bp

Protein-coding Genes

4772 genes

Non-Coding Genes

202 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Putative terminase large subunitBX52_06555Not AvailablePositive2418115 - 241923642997.4
Hypothetical proteinBX52_06560Not AvailablePositive2419233 - 24194458174.9
Putative portal proteinBX52_06565Not AvailablePositive2419445 - 242094756166.8
Head maturation proteaseBX52_06570Not AvailablePositive2420961 - 242291670450.0
Hypothetical proteinBX52_06575Not AvailablePositive2423004 - 242333010685.7
Hypothetical proteinBX52_06580Not AvailablePositive2423356 - 24236049140.93
Putative minor tail proteinBX52_06585Not AvailablePositive2423607 - 242423023256.2
Putative minor tail protein uBX52_06590Not AvailablePositive2424243 - 242464115214.2
Putative minor tail proteinBX52_06600Not AvailablePositive2425457 - 242581713785.3
Hypothetical proteinBX52_09225Not AvailablePositive2596205 - 259803768192.0

Displaying genes 1 – 10 of 4974 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

4785 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000173(R)-3-Hydroxybutyric acidC4H8O3Chemical structure of (R)-3-Hydroxybutyric acid625-72-3
Average104.0473Da
Monoisotopic104.047344122Da
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000238(R)-3-phenyllactateC9H9O3Chemical structure of (R)-3-phenyllactateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm00002482,3-dihydroxy-3-methylbutanoateC5H10O4Chemical structure of 2,3-dihydroxy-3-methylbutanoate1756-18-9
Average134.1305Da
Monoisotopic134.0579088Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da

Displaying 1–10 of 4785 metabolites

Health Effects

No health effects information available for this bacterium.