Bifidobacterium subtile strain LMG 11597

Rodanaerobic

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Bifidobacteriales

Family

Bifidobacteriaceae

Genus

Bifidobacterium

Description

Bifidobacterium subtile strain LMG 11597 is an anaerobic bacterium characterized by its rod-shaped morphology and the presence of flagella. This strain possesses a single replicon, which is a defining feature of its genomic structure. The accession number associated with this strain is JGZR00000000.1, indicating its genetic sequence is cataloged for further study. As an anaerobic organism, Bifidobacterium subtile LMG 11597 thrives in environments devoid of oxygen, which is typical for many members of the Bifidobacterium genus. These bacteria play a significant role in gut health and are commonly found in the intestines of humans and other mammals, where they contribute to the fermentation of dietary fibers and the production of short-chain fatty acids. The presence of flagella suggests that this strain may have enhanced motility, allowing it to navigate through the gut environment effectively. Understanding the characteristics of Bifidobacterium subtile strain LMG 11597 can provide insights into its ecological role in the microbiome. Its anaerobic nature and ability to move may facilitate its colonization and functional contributions to the gut microbiota, promoting digestive health and potentially influencing host metabolism. Further investigation into its specific functions and interactions within the gut ecosystem could reveal important implications for microbiome research and probiotic applications.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderBifidobacteriales
FamilyBifidobacteriaceae
GenusBifidobacterium
SpeciesBifidobacterium subtile
Strainstrain LMG 11597

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bifidobacterium subtile strain LMG 11597


Gene Summary

Adenine Count

547684 bp

Thymine Count

542727 bp

Guanine Count

849959 bp

Cytosine Count

849715 bp

Genome Length

2790088 bp

Protein-coding Genes

2260 genes

Non-Coding Genes

52 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
5s ribosomal rnaNot AvailableNot AvailablePositive50 - 164Not Available
toxin-antitoxin system, toxin component, pin familyBISU_1260Not AvailableNegative108 - 65620358.3
excisionase family dna binding domain-containing proteinBISU_1261Not AvailableNegative669 - 105213847.4
dipeptidaseBISU_1262Not AvailablePositive1173 - 174221446.3
hypothetical proteinBISU_1263Not AvailablePositive1889 - 218511360.6
aspartate racemaseBISU_1264Not AvailableNegative2331 - 309527004.2
hypothetical proteinBISU_1265Not AvailableNegative3922 - 448520182.4
transcriptional regulatorBISU_1266Not AvailableNegative4486 - 537930986.9
transport proteinBISU_1267Not AvailablePositive5450 - 638833293.1
hypothetical proteinBISU_1268Not AvailablePositive6907 - 70655399.75

Displaying genes 1 – 10 of 2312 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

135 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000272(E)-4-coumarateC9H7O3Chemical structure of (E)-4-coumarateNot available
Average163.1501Da
Monoisotopic163.0395191Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000400(R)-10-hydroxyoctadecanoateC18H35O3Chemical structure of (R)-10-hydroxyoctadecanoateNot available
Average299.476Da
Monoisotopic299.2591686Da
BASm00006473-hydroxypropanoateC3H5O3Chemical structure of 3-hydroxypropanoateNot available
Average89.071Da
Monoisotopic89.0244176Da
BASm00007164-methylsulfanyl-2-oxobutanoateC5H7O3SChemical structure of 4-methylsulfanyl-2-oxobutanoateNot available
Average147.17Da
Monoisotopic147.012138839Da
BASm0000908propanoateC3H5O2Chemical structure of propanoateNot available
Average73.072Da
Monoisotopic73.029502981Da

Displaying 1–10 of 135 metabolites

Health Effects

No health effects information available for this bacterium.