Photorhabdus temperata subsp. temperata Meg1

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Morganellaceae

Genus

Photorhabdus

Description

Photorhabdus temperata subsp. temperata Meg1 is a Gram-negative bacterium characterized by its rod shape and the presence of flagella, which facilitate motility. This subspecies is notable for having a single replicon, suggesting a streamlined genomic structure conducive to its ecological niche. The accession number for this strain is JGVH00000000.1, which provides a reference for genome sequencing and further study. The presence of flagella indicates that P. temperata subsp. temperata Meg1 is likely capable of active movement, which may play a role in its interactions with its environment, including host organisms. Photorhabdus species are known to form symbiotic relationships with nematodes, particularly in the context of insect pathogenicity. This characteristic may highlight the ecological significance of P. temperata subsp. temperata Meg1, suggesting its role in biological control as it can be involved in the insect infection process via the nematode vector. The streamlined genome and motility could provide advantages in adapting to various environmental conditions or host interactions. Understanding the traits of P. temperata subsp. temperata Meg1 can enhance insights into its ecological roles and potential applications in biocontrol strategies.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyMorganellaceae
GenusPhotorhabdus
SpeciesPhotorhabdus temperata
Strainsubsp. temperata Meg1

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Photorhabdus temperata subsp. temperata Meg1
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Photorhabdus temperata subsp. temperata Meg1

Gene Summary

Adenine Count

1399467 bp

Thymine Count

1402743 bp

Guanine Count

1069219 bp

Cytosine Count

1060018 bp

Genome Length

4931447 bp

Protein-coding Genes

4082 genes

Non-Coding Genes

368 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
transcriptional regulator, arac familyMEG1DRAFT_00279Not AvailablePositive308858 - 30967631374.7
hypothetical proteinMEG1DRAFT_00280Not AvailablePositive309791 - 31062732905.5
type iii secretion system chaperone, yscb familyMEG1DRAFT_00281Not AvailablePositive310642 - 31106416146.3
type iii secretion outer membrane pore, yscc/hrcc familyMEG1DRAFT_00282Not AvailablePositive311052 - 31289067761.8
type iii secretion apparatus protein, yscd/hrpq familyMEG1DRAFT_00283Not AvailablePositive312887 - 31415848102.7
type iii secretion system protein, ysee familyMEG1DRAFT_00284Not AvailablePositive314155 - 3143768223.61
type iii secretion system major needle protein, yscf/mxih/prgi familyMEG1DRAFT_00285Not AvailablePositive314360 - 3146149186.01
type iii secretion protein, yscg familyMEG1DRAFT_00286Not AvailablePositive314617 - 31497013141.6
type iii secretion effector, yopr familyMEG1DRAFT_00287Not AvailablePositive314963 - 31552921633.7
type iii secretion system major needle protein, yscf/mxih/prgi familyMEG1DRAFT_00288Not AvailablePositive315529 - 31586712486.9

Displaying genes 641 – 650 of 4450 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.