Photorhabdus temperata subsp. temperata Meg1

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Morganellaceae

Genus

Photorhabdus

Description

Photorhabdus temperata subsp. temperata Meg1 is a Gram-negative bacterium characterized by its rod shape and the presence of flagella, which facilitate motility. This subspecies is notable for having a single replicon, suggesting a streamlined genomic structure conducive to its ecological niche. The accession number for this strain is JGVH00000000.1, which provides a reference for genome sequencing and further study. The presence of flagella indicates that P. temperata subsp. temperata Meg1 is likely capable of active movement, which may play a role in its interactions with its environment, including host organisms. Photorhabdus species are known to form symbiotic relationships with nematodes, particularly in the context of insect pathogenicity. This characteristic may highlight the ecological significance of P. temperata subsp. temperata Meg1, suggesting its role in biological control as it can be involved in the insect infection process via the nematode vector. The streamlined genome and motility could provide advantages in adapting to various environmental conditions or host interactions. Understanding the traits of P. temperata subsp. temperata Meg1 can enhance insights into its ecological roles and potential applications in biocontrol strategies.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyMorganellaceae
GenusPhotorhabdus
SpeciesPhotorhabdus temperata
Strainsubsp. temperata Meg1

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Photorhabdus temperata subsp. temperata Meg1
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Photorhabdus temperata subsp. temperata Meg1

Gene Summary

Adenine Count

1399467 bp

Thymine Count

1402743 bp

Guanine Count

1069219 bp

Cytosine Count

1060018 bp

Genome Length

4931447 bp

Protein-coding Genes

4082 genes

Non-Coding Genes

368 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type iii secretion effector delivery regulator, tyea familyMEG1DRAFT_00269Not AvailableNegative299847 - 30013411019.0
type iii secretion outer membrane protein popnMEG1DRAFT_00270Not AvailableNegative300115 - 30098732217.3
type iii secretion system atpase, flii/yscnMEG1DRAFT_00271Not AvailablePositive301175 - 30250048012.1
type iii secretion protein yscoMEG1DRAFT_00272Not AvailablePositive302497 - 30295818699.3
type iii secretion system needle length determinantMEG1DRAFT_00273Not AvailablePositive302970 - 30432549952.7
type iii secretion system apparatus protein yscq/hrcqMEG1DRAFT_00274Not AvailablePositive304322 - 30525134538.8
type iii secretion apparatus protein, yscr/hrcr familyMEG1DRAFT_00275Not AvailablePositive305248 - 30590124365.6
type iii secretion protein, hrpo familyMEG1DRAFT_00276Not AvailablePositive305904 - 3061709601.18
type iii secretion protein spar/ysct/hrctMEG1DRAFT_00277Not AvailablePositive306167 - 30695528574.1
type iii secretion protein, yscu/hrpy familyMEG1DRAFT_00278Not AvailablePositive306952 - 30800739613.1

Displaying genes 631 – 640 of 4450 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.