Photorhabdus temperata subsp. temperata Meg1

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Morganellaceae

Genus

Photorhabdus

Description

Photorhabdus temperata subsp. temperata Meg1 is a Gram-negative bacterium characterized by its rod shape and the presence of flagella, which facilitate motility. This subspecies is notable for having a single replicon, suggesting a streamlined genomic structure conducive to its ecological niche. The accession number for this strain is JGVH00000000.1, which provides a reference for genome sequencing and further study. The presence of flagella indicates that P. temperata subsp. temperata Meg1 is likely capable of active movement, which may play a role in its interactions with its environment, including host organisms. Photorhabdus species are known to form symbiotic relationships with nematodes, particularly in the context of insect pathogenicity. This characteristic may highlight the ecological significance of P. temperata subsp. temperata Meg1, suggesting its role in biological control as it can be involved in the insect infection process via the nematode vector. The streamlined genome and motility could provide advantages in adapting to various environmental conditions or host interactions. Understanding the traits of P. temperata subsp. temperata Meg1 can enhance insights into its ecological roles and potential applications in biocontrol strategies.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyMorganellaceae
GenusPhotorhabdus
SpeciesPhotorhabdus temperata
Strainsubsp. temperata Meg1

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Photorhabdus temperata subsp. temperata Meg1
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Photorhabdus temperata subsp. temperata Meg1

Gene Summary

Adenine Count

1399467 bp

Thymine Count

1402743 bp

Guanine Count

1069219 bp

Cytosine Count

1060018 bp

Genome Length

4931447 bp

Protein-coding Genes

4082 genes

Non-Coding Genes

368 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
peptide deformylaseMEG1DRAFT_03933Not AvailableNegative4412654 - 441316619493.7
dna protecting protein dpraMEG1DRAFT_03934Not AvailablePositive4413300 - 441438539381.1
zn-finger domain-containing protein (topoisomerase type i-like)MEG1DRAFT_03935Not AvailablePositive4414448 - 441498720053.6
translation factor sua5MEG1DRAFT_03936Not AvailablePositive4415001 - 441557020912.0
shikimate dehydrogenaseMEG1DRAFT_03937Not AvailablePositive4415578 - 441639629635.8
protein of unknown function (duf1488)MEG1DRAFT_03938Not AvailablePositive4416393 - 441665310288.0
isoleucine patch superfamily enzyme, carbonic anhydrase/acetyltransferaseMEG1DRAFT_03939Not AvailableNegative4416629 - 441717419486.7
transcriptional regulator, laci familyMEG1DRAFT_03940Not AvailablePositive4418561 - 441955636530.4
gluconate kinase, ski familyMEG1DRAFT_03941Not AvailablePositive4419724 - 442026320324.4
gluconate transporterMEG1DRAFT_03942Not AvailablePositive4420263 - 442160045903.0

Displaying genes 3991 – 4000 of 4450 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.