Photorhabdus temperata subsp. temperata Meg1

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Morganellaceae

Genus

Photorhabdus

Description

Photorhabdus temperata subsp. temperata Meg1 is a Gram-negative bacterium characterized by its rod shape and the presence of flagella, which facilitate motility. This subspecies is notable for having a single replicon, suggesting a streamlined genomic structure conducive to its ecological niche. The accession number for this strain is JGVH00000000.1, which provides a reference for genome sequencing and further study. The presence of flagella indicates that P. temperata subsp. temperata Meg1 is likely capable of active movement, which may play a role in its interactions with its environment, including host organisms. Photorhabdus species are known to form symbiotic relationships with nematodes, particularly in the context of insect pathogenicity. This characteristic may highlight the ecological significance of P. temperata subsp. temperata Meg1, suggesting its role in biological control as it can be involved in the insect infection process via the nematode vector. The streamlined genome and motility could provide advantages in adapting to various environmental conditions or host interactions. Understanding the traits of P. temperata subsp. temperata Meg1 can enhance insights into its ecological roles and potential applications in biocontrol strategies.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyMorganellaceae
GenusPhotorhabdus
SpeciesPhotorhabdus temperata
Strainsubsp. temperata Meg1

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Photorhabdus temperata subsp. temperata Meg1
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Photorhabdus temperata subsp. temperata Meg1

Gene Summary

Adenine Count

1399467 bp

Thymine Count

1402743 bp

Guanine Count

1069219 bp

Cytosine Count

1060018 bp

Genome Length

4931447 bp

Protein-coding Genes

4082 genes

Non-Coding Genes

368 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
acetyl-coa carboxylase carboxyltransferase subunit alphaMEG1DRAFT_01738Not AvailableNegative2014526 - 201548535479.8
dna polymerase iii, alpha subunitMEG1DRAFT_01739Not AvailableNegative2015499 - 2018981130446.0
rnase hiiMEG1DRAFT_01740Not AvailableNegative2019039 - 201962621198.9
lipid-a-disaccharide synthaseMEG1DRAFT_01741Not AvailableNegative2019626 - 202079543277.4
acyl-(acyl-carrier-protein)--udp-n- acetylglucosamine o-acyltransferaseMEG1DRAFT_01742Not AvailableNegative2020815 - 202160328508.3
3-hydroxyacyl-(acyl-carrier-protein) dehydrataseMEG1DRAFT_01743Not AvailableNegative2021607 - 202205917005.8
udp-3-o-(3-hydroxymyristoyl) glucosamine n-acyltransferaseMEG1DRAFT_01744Not AvailableNegative2022180 - 202320836252.7
periplasmic chaperone for outer membrane proteins skpMEG1DRAFT_01745Not AvailableNegative2023212 - 202370918158.9
beta-barrel assembly machine subunit bamaMEG1DRAFT_01746Not AvailableNegative2023836 - 202628390395.5
rip metalloprotease rsepMEG1DRAFT_01747Not AvailableNegative2026264 - 202761649218.5

Displaying genes 2061 – 2070 of 4450 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.