Photorhabdus temperata subsp. temperata Meg1

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Morganellaceae

Genus

Photorhabdus

Description

Photorhabdus temperata subsp. temperata Meg1 is a Gram-negative bacterium characterized by its rod shape and the presence of flagella, which facilitate motility. This subspecies is notable for having a single replicon, suggesting a streamlined genomic structure conducive to its ecological niche. The accession number for this strain is JGVH00000000.1, which provides a reference for genome sequencing and further study. The presence of flagella indicates that P. temperata subsp. temperata Meg1 is likely capable of active movement, which may play a role in its interactions with its environment, including host organisms. Photorhabdus species are known to form symbiotic relationships with nematodes, particularly in the context of insect pathogenicity. This characteristic may highlight the ecological significance of P. temperata subsp. temperata Meg1, suggesting its role in biological control as it can be involved in the insect infection process via the nematode vector. The streamlined genome and motility could provide advantages in adapting to various environmental conditions or host interactions. Understanding the traits of P. temperata subsp. temperata Meg1 can enhance insights into its ecological roles and potential applications in biocontrol strategies.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyMorganellaceae
GenusPhotorhabdus
SpeciesPhotorhabdus temperata
Strainsubsp. temperata Meg1

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Photorhabdus temperata subsp. temperata Meg1
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Photorhabdus temperata subsp. temperata Meg1

Gene Summary

Adenine Count

1399467 bp

Thymine Count

1402743 bp

Guanine Count

1069219 bp

Cytosine Count

1060018 bp

Genome Length

4931447 bp

Protein-coding Genes

4082 genes

Non-Coding Genes

368 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lactate dehydrogenase-like oxidoreductaseMEG1DRAFT_00783Not AvailableNegative881944 - 88294837169.7
acyl carrier protein phosphodiesteraseMEG1DRAFT_00784Not AvailableNegative883432 - 88403422387.0
atp-dependent helicase hrpaMEG1DRAFT_00785Not AvailablePositive884288 - 888031142778.0
type vi secretion system effector, hcp1 familyMEG1DRAFT_00786Not AvailableNegative888082 - 88856718476.1
hypothetical proteinMEG1DRAFT_00787Not AvailableNegative888570 - 88909718979.7
hypothetical proteinMEG1DRAFT_00788Not AvailableNegative889094 - 88945613156.7
p pilus assembly protein, pilin fimaMEG1DRAFT_00789Not AvailableNegative890086 - 89107836955.9
p pilus assembly protein, porin papcMEG1DRAFT_00790Not AvailableNegative891098 - 89363895339.4
p pilus assembly protein, chaperone papdMEG1DRAFT_00791Not AvailableNegative893681 - 89435525650.2
p pilus assembly protein, pilin fimaMEG1DRAFT_00792Not AvailableNegative894480 - 89501018434.6

Displaying genes 1121 – 1130 of 4450 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.