Escherichia coli O128:H2 str. 2011C-3317

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli O128:H2 str. 2011C-3317 is a Gram-negative, rod-shaped bacterium that is facultatively anaerobic, allowing it to thrive in both aerobic and anaerobic environments. This strain is known to inhabit host-associated environments, indicative of its potential role in the microbiota of various hosts. It exhibits a characteristic arrangement of cells in pairs and singles, which is typical of many E. coli strains. E. coli O128:H2 str. 2011C-3317 is motile, possessing flagella that enable it to move and navigate through its environment. The optimal growth temperature for this strain is 37°C, which aligns with the mesophilic temperature range, suggesting that it is well-adapted to the warm conditions found within host organisms. The strain contains a single replicon and exhibits a double membrane structure, consistent with the typical cell wall architecture of Gram-negative bacteria. Its free-living biotic relationship indicates that it can survive independently, although it is also associated with host environments. The ability of E. coli O128:H2 str. 2011C-3317 to thrive in host-associated habitats while also possessing free-living capabilities highlights its ecological versatility. This adaptability may allow it to play various roles in microbial communities, potentially influencing host health and contributing to the dynamics of gut microbiota.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
StrainO128:H2 2011C-3317

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli O128:H2 str. 2011C-3317
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Escherichia coli O128:H2 str. 2011C-3317


Gene Summary

Adenine Count

1376619 bp

Thymine Count

1384629 bp

Guanine Count

1424450 bp

Cytosine Count

1411734 bp

Genome Length

5597432 bp

Protein-coding Genes

4943 genes

Non-Coding Genes

569 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
AttlNot AvailableNot AvailablePositive143984 - 143998Not Available
Tail fiber assembly proteinBU64_00995Not AvailableNegative151475 - 15178011649.9
methyltransferaseBU64_01000Not AvailablePositive151849 - 15250524046.8
nucleocapsid proteinBU64_01005Not AvailableNegative152463 - 1525914659.46
Tail fiber assembly proteinBU64_01010Not AvailableNegative152560 - 15314421640.2
Qin prophageBU64_01015Not AvailableNegative153144 - 15480557222.0
Hypothetical proteinBU64_01020Not AvailablePositive154924 - 15567324487.8
hypothetical proteinBU64_01025Not AvailablePositive155642 - 15594711734.1
MomBU64_01035Not AvailableNegative156177 - 15691428824.6
ComBU64_01040Not AvailableNegative156868 - 1570687719.28

Displaying genes 1 – 10 of 5512 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

4785 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000173(R)-3-Hydroxybutyric acidC4H8O3Chemical structure of (R)-3-Hydroxybutyric acid625-72-3
Average104.0473Da
Monoisotopic104.047344122Da
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000238(R)-3-phenyllactateC9H9O3Chemical structure of (R)-3-phenyllactateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm00002482,3-dihydroxy-3-methylbutanoateC5H10O4Chemical structure of 2,3-dihydroxy-3-methylbutanoate1756-18-9
Average134.1305Da
Monoisotopic134.0579088Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da

Displaying 1–10 of 4785 metabolites

Health Effects

No health effects information available for this bacterium.